RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 APTXQ7Z2E3 356 aaKnown RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 TSC22D3Q99576 134 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 NAPBQ9H115 298 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 TRMT112Q9UI30 125 aaKnown RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBR1-202ENST00000546274 TAF1P21675 1872 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 SCN7AQ01118 1682 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 HDLBPQ00341 1268 aaKnown RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 DBN1Q16643 649 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 TRMT44Q8IYL2 757 aaKnown RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 CRACR2BQ8N4Y2 399 aaPredicted RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 ZNF579Q8NAF0 562 aaKnown RBP8.75□□□□□ -1.01
UBR1-202ENST00000546274 HOOK2Q96ED9 719 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 SELENOOQ9BVL4 669 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 NFE2L3Q9Y4A8 694 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 DISP2A7MBM2 1401 aa8.75□□□□□ -1.01
UBR1-202ENST00000546274 A0A087X0B3 334 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 MAFGO15525 162 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 MAGEA10P43363 369 aaPredicted RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 LRRC23Q53EV4 343 aaPredicted RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 CCDC125Q86Z20 511 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 NUP58Q9BVL2 599 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 PNPLA7Q6ZV29 1317 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ZC3H4Q9UPT8 1303 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 LAMB1P07942 1786 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 SMIM22K7EJ46 135 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBR1-202ENST00000546274 SPRED3Q2MJR0 410 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 RILPL1Q5EBL4 403 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 CWF19L1Q69YN2 538 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 SPECC1LQ69YQ0 1117 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 MFSD6Q6ZSS7 791 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ARHGAP22Q7Z5H3 698 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ADGRA1Q86SQ6 560 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 FAM81AQ8TBF8 368 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ZNF473Q8WTR7 871 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 WASF1Q92558 559 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ARL8AQ96BM9 186 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 CAPZA3Q96KX2 299 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 RUFY1Q96T51 708 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 KRT23Q9C075 422 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 SAMSN1Q9NSI8 373 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 SRPRBQ9Y5M8 271 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ZSCAN9O15535 394 aaPredicted RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 STX10O60499 249 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ANP32DO95626 131 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 MYL1P05976 194 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 ZBED6P86452 979 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 NR1I3Q14994 352 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 RTN1Q16799 776 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 EARS2Q5JPH6 523 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBR1-202ENST00000546274 SPATS2Q86XZ4 545 aaKnown RBP8.74□□□□□ -1.01
UBR1-202ENST00000546274 MLKLQ8NB16 471 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 CSRNP2Q9H175 543 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 MYO1AQ9UBC5 1043 aa8.74□□□□□ -1.01
UBR1-202ENST00000546274 DNM1LO00429 736 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 WNT7AO00755 349 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 ABL1P00519 1130 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 TUBBP07437 444 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 PAX3P23760 479 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 SF3A3Q12874 501 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR1-202ENST00000546274 PNMA8AQ86V59 439 aaPredicted RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 TRIM42Q8IWZ5 723 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 SYCP3Q8IZU3 236 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 CCDC82Q8N4S0 544 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 OSBPL9Q96SU4 736 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 NOD2Q9HC29 1040 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 ERVV-1B6SEH8 477 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 E7EVH7 732 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 AHCYL1O43865 530 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 DEXIO95424 95 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 FESP07332 822 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 IMPDH2P12268 514 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 LSP1P33241 339 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 MRPS25P82663 173 aaKnown RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 TMEM62Q0P6H9 643 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 WTAPQ15007 396 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 SEC23AQ15436 765 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 PKN1Q16512 942 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 HIBCHQ6NVY1 386 aaPredicted RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 WDR93Q6P2C0 686 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 TCP11Q8WWU5 503 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 BICD1Q96G01 975 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 PPANQ9NQ55 473 aaKnown RBP8.73□□□□□ -1.01
UBR1-202ENST00000546274 COL1A1P02452 1464 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms