RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SALL3Q9BXA9 1300 aa19.75■□□□□ 0.75
CPSF7-225ENST00000545934 LOC102724159A0A0B4J2E5 919 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 TSPY2A6NKD2 308 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 FGRP09769 529 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 PWP2Q15269 919 aaKnown RBP19.74■□□□□ 0.75
CPSF7-225ENST00000545934 RPUSD2Q8IZ73 545 aaKnown RBP19.74■□□□□ 0.75
CPSF7-225ENST00000545934 TET1Q8NFU7 2136 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 DCAF4Q8WV16 495 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 FSD1Q9BTV5 496 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 PCDHA11Q9Y5I1 949 aa19.74■□□□□ 0.75
CPSF7-225ENST00000545934 ALDH5A1P51649 535 aaPredicted RBP19.73■□□□□ 0.75
CPSF7-225ENST00000545934 MRPS5P82675 430 aaKnown RBP19.73■□□□□ 0.75
CPSF7-225ENST00000545934 NSMFQ6X4W1 530 aa19.73■□□□□ 0.75
CPSF7-225ENST00000545934 KIAA1211Q6ZU35 1233 aa19.73■□□□□ 0.75
CPSF7-225ENST00000545934 ADAMTS19Q8TE59 1207 aa19.73■□□□□ 0.75
CPSF7-225ENST00000545934 SCLYQ96I15 445 aa19.73■□□□□ 0.75
CPSF7-225ENST00000545934 LAMA4Q16363 1823 aa19.73■□□□□ 0.75
CPSF7-225ENST00000545934 COL4A4P53420 1690 aaPredicted RBP19.72■□□□□ 0.75
CPSF7-225ENST00000545934 ORC4O43929 436 aa19.72■□□□□ 0.75
CPSF7-225ENST00000545934 IGFBP4P22692 258 aa19.72■□□□□ 0.75
CPSF7-225ENST00000545934 RABGGTBP53611 331 aa19.72■□□□□ 0.75
CPSF7-225ENST00000545934 PURAQ00577 322 aaKnown RBP19.72■□□□□ 0.75
CPSF7-225ENST00000545934 CCDC85BQ15834 202 aaPredicted RBP19.72■□□□□ 0.75
CPSF7-225ENST00000545934 TTBK2Q6IQ55 1244 aa19.72■□□□□ 0.75
CPSF7-225ENST00000545934 ADD3Q9UEY8 706 aaKnown RBP19.72■□□□□ 0.75
CPSF7-225ENST00000545934 SLC4A7Q9Y6M7 1214 aa19.72■□□□□ 0.75
CPSF7-225ENST00000545934 PFKMP08237 780 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 MYOGP15173 224 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 BAATQ14032 418 aaPredicted RBP19.71■□□□□ 0.75
CPSF7-225ENST00000545934 VPS53Q5VIR6 699 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 TRMT13Q9NUP7 481 aaKnown RBP19.71■□□□□ 0.75
CPSF7-225ENST00000545934 POLR3EQ9NVU0 708 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 PCDHB15Q9Y5E8 787 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 NCOR1O75376 2440 aa19.71■□□□□ 0.75
CPSF7-225ENST00000545934 NFIBO00712 420 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 SUPT20HL2P0C7V6 817 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 COL9A1P20849 921 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 ALX1Q15699 326 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 PPP2R2DQ66LE6 453 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 CLEC4DQ8WXI8 215 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 WDR11Q9BZH6 1224 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 TNKSO95271 1327 aa19.7■□□□□ 0.74
CPSF7-225ENST00000545934 MYH7BA7E2Y1 1941 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 RANBP6O60518 1105 aaKnown RBP19.69■□□□□ 0.74
CPSF7-225ENST00000545934 CYP2C9P11712 490 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 ATP2A2P16615 1042 aaKnown RBP19.69■□□□□ 0.74
CPSF7-225ENST00000545934 POU3F3P20264 500 aaPredicted RBP19.69■□□□□ 0.74
CPSF7-225ENST00000545934 MX1P20591 662 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 SLC16A2P36021 539 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 CPT1AP50416 773 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 TTLL4Q14679 1199 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 SYDE2Q5VT97 1194 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 TCP11L1Q9NUJ3 509 aa19.69■□□□□ 0.74
CPSF7-225ENST00000545934 PRRC2BQ5JSZ5 2229 aaKnown RBP19.68■□□□□ 0.74
CPSF7-225ENST00000545934 EDNRBP24530 442 aa19.68■□□□□ 0.74
CPSF7-225ENST00000545934 CCDC96Q2M329 555 aa19.68■□□□□ 0.74
CPSF7-225ENST00000545934 SLC30A10Q6XR72 485 aa19.68■□□□□ 0.74
CPSF7-225ENST00000545934 UHRF1Q96T88 793 aaPredicted RBP19.68■□□□□ 0.74
CPSF7-225ENST00000545934 MTG1Q9BT17 334 aaPredicted RBP19.68■□□□□ 0.74
CPSF7-225ENST00000545934 BDP1A6H8Y1 2624 aa19.67■□□□□ 0.74
CPSF7-225ENST00000545934 TOP1P11387 765 aaKnown RBP19.67■□□□□ 0.74
CPSF7-225ENST00000545934 BMP1P13497 986 aa19.67■□□□□ 0.74
CPSF7-225ENST00000545934 RFC2P35250 354 aa19.67■□□□□ 0.74
CPSF7-225ENST00000545934 OR6J1Q8NGC5 347 aa19.67■□□□□ 0.74
CPSF7-225ENST00000545934 MTMR7Q9Y216 660 aa19.67■□□□□ 0.74
CPSF7-225ENST00000545934 A6NJR5 290 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 ZBBXA8MT70 800 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 PITPNM1O00562 1244 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 NKRFO15226 690 aaKnown RBP eCLIP19.66■□□□□ 0.74
CPSF7-225ENST00000545934 MYL3P08590 195 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 NBPF20Q3BBV1 942 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 NFRKBQ6P4R8 1299 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 HELLSQ9NRZ9 838 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
CPSF7-225ENST00000545934 SIP14410 1827 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 CA3P07451 260 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 SNHG28P0DPA3 235 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 PDHBP11177 359 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 PTPN11Q06124 597 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-225ENST00000545934 TMEM67Q5HYA8 995 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 RNF207Q6ZRF8 634 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 DEFB128Q7Z7B8 93 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 PHOSPHO2Q8TCD6 241 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 SLC9A7Q96T83 725 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 TSPYL2Q9H2G4 693 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-225ENST00000545934 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 PNMA2Q9UL42 364 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 MTCH2Q9Y6C9 303 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-225ENST00000545934 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
CPSF7-225ENST00000545934 KPNA6O60684 536 aa19.64■□□□□ 0.73
CPSF7-225ENST00000545934 FGAP02671 866 aa19.64■□□□□ 0.73
CPSF7-225ENST00000545934 IQCF3P0C7M6 154 aa19.64■□□□□ 0.73
CPSF7-225ENST00000545934 CALML3P27482 149 aa19.64■□□□□ 0.73
CPSF7-225ENST00000545934 RPS6P62753 249 aaKnown RBP19.64■□□□□ 0.73
CPSF7-225ENST00000545934 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
CPSF7-225ENST00000545934 SCFD2Q8WU76 684 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms