RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 LETM2Q2VYF4 491 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 SEMA6BQ9H3T3 888 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 DUSP10Q9Y6W6 482 aa17.08■□□□□ 0.32
CNN3-207ENST00000545882 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 ZNF263O14978 683 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 LMAN1P49257 510 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 NAPAP54920 295 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 ASIC1P78348 528 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 NONOQ15233 471 aaKnown RBP eCLIP17.07■□□□□ 0.32
CNN3-207ENST00000545882 KIAA1328Q86T90 577 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
CNN3-207ENST00000545882 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 TRIM21P19474 475 aaKnown RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 TECP42680 631 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 ZSCAN26Q16670 478 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 FIGNQ5HY92 759 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 A0A1W2PQJ5 194 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 KRT86O43790 486 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 CAPN2P17655 700 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 MTIF2P46199 727 aaKnown RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 CDK8P49336 464 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 CDK17Q00537 523 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 CYP27A1Q02318 531 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 CAPZA3Q96KX2 299 aa17.06■□□□□ 0.32
CNN3-207ENST00000545882 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 NOC4LQ9BVI4 516 aaKnown RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
CNN3-207ENST00000545882 ZC3H4Q9UPT8 1303 aaKnown RBP17.05■□□□□ 0.32
CNN3-207ENST00000545882 ZNF185O15231 689 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 EDIL3O43854 480 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 BAG3O95817 575 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 PLEKP08567 350 aaPredicted RBP17.05■□□□□ 0.32
CNN3-207ENST00000545882 GSTO1P78417 241 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 GRB10Q13322 594 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 FAM114A1Q8IWE2 563 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 USP21Q9UK80 565 aa17.05■□□□□ 0.32
CNN3-207ENST00000545882 NFIXQ14938 502 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 CENPPQ6IPU0 288 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 C16orf86Q6ZW13 317 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 FAM71BQ8TC56 605 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 TBCKQ8TEA7 893 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
CNN3-207ENST00000545882 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 PIGSQ96S52 555 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 EYA3Q99504 573 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 C6orf50Q9HD87 102 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 TMEM260Q9NX78 707 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 LEMD3Q9Y2U8 911 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 EPHB6O15197 1021 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 HNRNPH3P31942 346 aaKnown RBP17.04■□□□□ 0.32
CNN3-207ENST00000545882 VAV2P52735 878 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 RAD51AP2Q09MP3 1159 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 EHBP1Q8NDI1 1231 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 GOLGA5Q8TBA6 731 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 SLC39A2Q9NP94 309 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
CNN3-207ENST00000545882 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
CNN3-207ENST00000545882 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
CNN3-207ENST00000545882 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 TARSL2A2RTX5 802 aaKnown RBP17.03■□□□□ 0.32
CNN3-207ENST00000545882 MYMKA6NI61 221 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 SYF2O95926 243 aaKnown RBP17.03■□□□□ 0.32
CNN3-207ENST00000545882 GNA11P29992 359 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 ACTN2P35609 894 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 PPP1R2P41236 205 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
CNN3-207ENST00000545882 MTMR9Q96QG7 549 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 VIPAS39Q9H9C1 493 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 VAT1LQ9HCJ6 419 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 ARHGAP20Q9P2F6 1191 aa17.03■□□□□ 0.32
CNN3-207ENST00000545882 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 LDHCP07864 332 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 SMARCA1P28370 1054 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 BTDP43251 543 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 NOVP48745 357 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms