RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 ACVR2BQ13705 512 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 DMRTA1Q5VZB9 504 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 ARMCX2Q7L311 632 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 MAFAQ8NHW3 353 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 RNPC3Q96LT9 517 aaKnown RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 TOX2Q96NM4 488 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 FAM184BQ9ULE4 1060 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-205ENST00000545868 MOXD2PA6NHM9 499 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 TTLL1O95922 423 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 ZFYP08048 801 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-205ENST00000545868 RAG1P15918 1043 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 GNAT2P19087 354 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 PBX2P40425 430 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 CDK7P50613 346 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 CCDC144BQ3MJ40 725 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 C16orf59Q7L2K0 433 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 CHMP4CQ96CF2 233 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-205ENST00000545868 INCENPQ9NQS7 918 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 HOMER2Q9NSB8 354 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 TMEM39AQ9NV64 488 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
GABRB3-205ENST00000545868 PCDHB15Q9Y5E8 787 aa11.45□□□□□ -0.58
GABRB3-205ENST00000545868 DOCK5Q9H7D0 1870 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 NMT2O60551 498 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ZBED4O75132 1171 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 TIMP1P01033 207 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ASGR1P07306 291 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 C6orf222P0C671 652 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 BMP3P12645 472 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 CD46P15529 392 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 OAZ1P54368 228 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 GJA9P57773 515 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 FPGSQ05932 587 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 PPARAQ07869 468 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 CCDC129Q6ZRS4 1044 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 USP38Q8NB14 1042 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 ABHD16BQ9H3Z7 469 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 A1CFQ9NQ94 594 aaKnown RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
GABRB3-205ENST00000545868 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 BAZ2BQ9UIF8 2168 aaKnown RBP11.44□□□□□ -0.58
GABRB3-205ENST00000545868 BRWD1Q9NSI6 2320 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 ELP1O95163 1332 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 TMEM232C9JQI7 657 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 APPP05067 770 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 SNAP25P60880 206 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 NKX3-2P78367 333 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 BEX3Q00994 111 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 TFAP4Q01664 338 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 GRIN2CQ14957 1233 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 FAM126BQ8IXS8 530 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 NUP133Q8WUM0 1156 aa11.43□□□□□ -0.58
GABRB3-205ENST00000545868 COL4A4P53420 1690 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-205ENST00000545868 GRIN2DO15399 1336 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 UMODL1Q5DID0 1318 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 TMEM265A0A087WTH1 108 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 GRXCR1A8MXD5 290 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 DCDC2CA8MYV0 355 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 ARVCFO00192 962 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 CD4P01730 458 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 FOSL2P15408 326 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 MCCP23508 829 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 STAT2P52630 851 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 TMEM240Q5SV17 173 aa11.42□□□□□ -0.58
GABRB3-205ENST00000545868 RASIP1Q5U651 963 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms