RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
SNHG1-221ENST00000544983 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 PXYLP1Q8TE99 480 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 CUL5Q93034 780 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
SNHG1-221ENST00000544983 APBA2Q99767 749 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
SNHG1-221ENST00000544983 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 ORC3Q9UBD5 711 aaPredicted RBP13.53□□□□□ -0.24
SNHG1-221ENST00000544983 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
SNHG1-221ENST00000544983 TRIM17Q9Y577 477 aa13.53□□□□□ -0.24
SNHG1-221ENST00000544983 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
SNHG1-221ENST00000544983 STXBP3O00186 592 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 NFIBO00712 420 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 CALML3P27482 149 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 FLT3LGP49771 235 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 HSD17B4P51659 736 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 RPS6P62753 249 aaKnown RBP13.52□□□□□ -0.25
SNHG1-221ENST00000544983 NSMFQ6X4W1 530 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 DNERQ8NFT8 737 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 RAET1EQ8TD07 263 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
SNHG1-221ENST00000544983 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.25
SNHG1-221ENST00000544983 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 CFBP00751 764 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 PRKCZQ05513 592 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
SNHG1-221ENST00000544983 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 FAM133AQ8N9E0 248 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.252e-31■■■□□ 19.1
SNHG1-221ENST00000544983 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 PTPN22Q9Y2R2 807 aa13.51□□□□□ -0.25
SNHG1-221ENST00000544983 ZNFX1Q9P2E3 1918 aaKnown RBP13.51□□□□□ -0.25
SNHG1-221ENST00000544983 PLXNB2O15031 1838 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 ASB14A6NK59 587 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 OPLAHO14841 1288 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 FOSP01100 380 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-221ENST00000544983 ADCY7P51828 1080 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 TRIM29Q14134 588 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 BECN1Q14457 450 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-221ENST00000544983 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 EHMT1Q9H9B1 1298 aa13.5□□□□□ -0.25
SNHG1-221ENST00000544983 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 MEIS2O14770 477 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 COBLO75128 1261 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
SNHG1-221ENST00000544983 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
SNHG1-221ENST00000544983 CAP1Q01518 475 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
SNHG1-221ENST00000544983 NSUN6Q8TEA1 469 aaKnown RBP13.49□□□□□ -0.25
SNHG1-221ENST00000544983 MAML3Q96JK9 1138 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 IWS1Q96ST2 819 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 GABRQQ9UN88 632 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
SNHG1-221ENST00000544983 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
SNHG1-221ENST00000544983 SPDYE3A6NKU9 549 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 ADCY3O60266 1144 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 JAK2O60674 1132 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 PGK2P07205 417 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 CYP2B6P20813 491 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 PDCP20941 246 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 GRK4P32298 578 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 NLRP5P59047 1200 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 TYW1BQ6NUM6 668 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 XRRA1Q6P2D8 792 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 RMDN3Q96TC7 470 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
SNHG1-221ENST00000544983 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
SNHG1-221ENST00000544983 IGHA2P01877 340 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 HMGCRP04035 888 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
SNHG1-221ENST00000544983 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
SNHG1-221ENST00000544983 CNTN2Q02246 1040 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNHG1-221ENST00000544983 ARHGEF16Q5VV41 709 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms