RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 NSFL1CQ9UNZ2 370 aaKnown RBP7.81□□□□□ -1.16
CPSF7-222ENST00000544585 PRKAB1Q9Y478 270 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 COL4A3BPQ9Y5P4 624 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 COL4A5P29400 1685 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 VIL1P09327 827 aaKnown RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 RPL6Q02878 288 aaKnown RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 TCIRG1Q13488 830 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 TBC1D10BQ4KMP7 808 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 DLK2Q6UY11 383 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 LSRQ86X29 649 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 RBBP8NLQ8NC74 664 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 ZC3H12CQ9C0D7 883 aaKnown RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 TRMT112Q9UI30 125 aaKnown RBP7.8□□□□□ -1.16
CPSF7-222ENST00000544585 SOX13Q9UN79 622 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
CPSF7-222ENST00000544585 SH3TC1Q8TE82 1336 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 BCORQ6W2J9 1755 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 ESYT3A0FGR9 886 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-222ENST00000544585 CPB1P15086 417 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 EIF2S2P20042 333 aaKnown RBP7.79□□□□□ -1.16
CPSF7-222ENST00000544585 TM4SF4P48230 202 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
CPSF7-222ENST00000544585 ARSHQ5FYA8 562 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 SCARA3Q6AZY7 606 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 ELMSAN1Q6PJG2 1045 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 VN1R5Q7Z5H4 357 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 CRIPAKQ8N1N5 446 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 STK35Q8TDR2 534 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 KANSL2Q9H9L4 492 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 BABAM1Q9NWV8 329 aa7.79□□□□□ -1.16
CPSF7-222ENST00000544585 SIPA1L3O60292 1781 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-222ENST00000544585 SIN3BO75182 1162 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 DDAH1O94760 285 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 ITGA6P23229 1130 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 CASP7P55210 303 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 CTBSQ01459 385 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 IKBKEQ14164 716 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
CPSF7-222ENST00000544585 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-222ENST00000544585 COPS6Q7L5N1 327 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 NLRP10Q86W26 655 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 AGBL3Q8NEM8 1001 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 GAL3ST3Q96A11 431 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 LACRTQ9GZZ8 138 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 ADAM19Q9H013 955 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 METTL14Q9HCE5 456 aaKnown RBP7.78□□□□□ -1.16
CPSF7-222ENST00000544585 PCDH12Q9NPG4 1184 aa7.78□□□□□ -1.16
CPSF7-222ENST00000544585 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-222ENST00000544585 ADM5C9JUS6 153 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 GPR25O00155 361 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 MARCH6O60337 910 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 ECE2O60344 883 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 ESRRAP11474 423 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 RPS8P62241 208 aaKnown RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 AP3B2Q13367 1082 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 HABP4Q5JVS0 413 aaKnown RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 ZNF468Q5VIY5 522 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 SLC51AQ86UW1 340 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 CDCA5Q96FF9 252 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 THUMPD2Q9BTF0 503 aaKnown RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 SMG9Q9H0W8 520 aaKnown RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 CWC22Q9HCG8 908 aaKnown RBP7.77□□□□□ -1.17
CPSF7-222ENST00000544585 POLLQ9UGP5 575 aa7.77□□□□□ -1.17
CPSF7-222ENST00000544585 NUP98P52948 1817 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 FKTNO75072 461 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 ATE1O95260 518 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 GJB6O95452 261 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 BMP4P12644 408 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 NF2P35240 595 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 MMP14P50281 582 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 INHBEP58166 350 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 ZNF280AP59817 542 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 ZNF252P-AS1Q0IIN9 211 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 AIMP1Q12904 312 aaKnown RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 C16orf86Q6ZW13 317 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 RASAL3Q86YV0 1011 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 C19orf47Q8N9M1 422 aaKnown RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 TBC1D16Q8TBP0 767 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 THAP3Q8WTV1 239 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 SH2B1Q9NRF2 756 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-222ENST00000544585 TMEM260Q9NX78 707 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 GGA3Q9NZ52 723 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 TSPYL4Q9UJ04 414 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 SLC6A14Q9UN76 642 aa7.76□□□□□ -1.17
CPSF7-222ENST00000544585 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms