RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 BADQ92934 168 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 STARD7Q9NQZ5 370 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 LAMA4Q16363 1823 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 DYNC1LI2O43237 492 aaPredicted RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 ANTXR2P58335 489 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 TRDNQ13061 729 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 SPC25Q9HBM1 224 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 ADD3Q9UEY8 706 aaKnown RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 MCM3APO60318 1980 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
CHEK1-218ENST00000544373 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
CHEK1-218ENST00000544373 CLTBP09497 229 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 NKX3-2P78367 333 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 FAAP100Q0VG06 881 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 LRIT3Q3SXY7 679 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 IQSEC1Q6DN90 963 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 ANKRD33Q7Z3H0 272 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 PCSK9Q8NBP7 692 aaKnown RBP12.5□□□□□ -0.41
CHEK1-218ENST00000544373 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 GLT1D1Q96MS3 346 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
CHEK1-218ENST00000544373 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
CHEK1-218ENST00000544373 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
CHEK1-218ENST00000544373 PALM3A6NDB9 673 aaPredicted RBP12.49□□□□□ -0.41
CHEK1-218ENST00000544373 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
CHEK1-218ENST00000544373 CDK7P50613 346 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 C9orf50Q5SZB4 431 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
CHEK1-218ENST00000544373 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 TOX2Q96NM4 488 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 COL20A1Q9P218 1284 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 ELP1O95163 1332 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 COL6A3P12111 3177 aa12.49□□□□□ -0.41
CHEK1-218ENST00000544373 EDNRBP24530 442 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 EPHB4P54760 987 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 TROAPQ12815 778 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
CHEK1-218ENST00000544373 DUSP28Q4G0W2 176 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 RALYLQ86SE5 291 aaKnown RBP12.48□□□□□ -0.41
CHEK1-218ENST00000544373 FBXO11Q86XK2 927 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 MB21D2Q8IYB1 491 aaPredicted RBP12.48□□□□□ -0.41
CHEK1-218ENST00000544373 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
CHEK1-218ENST00000544373 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 TMEM39AQ9NV64 488 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 GRIN2DO15399 1336 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 LCTP09848 1927 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 CDH23Q9H251 3354 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
CHEK1-218ENST00000544373 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 OPLAHO14841 1288 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 KIAA0355O15063 1070 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 PDE4DQ08499 809 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 GRM4Q14833 912 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 WTAPQ15007 396 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 SHHQ15465 462 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 Q7L0L9 218 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 AP5M1Q9H0R1 490 aa12.48□□□□□ -0.41
CHEK1-218ENST00000544373 ABCB11O95342 1321 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
CHEK1-218ENST00000544373 ARVCFO00192 962 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 SLC27A2O14975 620 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 CYTH3O43739 400 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 PSMC6P62333 389 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 TMEM67Q5HYA8 995 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 COPS5Q92905 334 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 PIGSQ96S52 555 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 Q9Y3F1 56 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
CHEK1-218ENST00000544373 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 ZBTB5O15062 677 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 ARIH2O95376 493 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 RAG1P15918 1043 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
CHEK1-218ENST00000544373 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 FAM126BQ8IXS8 530 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 MYL10Q9BUA6 226 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 LY9Q9HBG7 655 aa12.46□□□□□ -0.41
CHEK1-218ENST00000544373 MRPL11Q9Y3B7 192 aaKnown RBP12.46□□□□□ -0.41
CHEK1-218ENST00000544373 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms