RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 ALAS1P13196 640 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 NOVP48745 357 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 TFAP4Q01664 338 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
C2CD3-220ENST00000544293 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 TMCO2Q7Z6W1 182 aaPredicted RBP11.3□□□□□ -0.6
C2CD3-220ENST00000544293 HERC6Q8IVU3 1022 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 APPBP2Q92624 585 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 COG5Q9UP83 839 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 GREB1LQ9C091 1923 aaPredicted RBP11.3□□□□□ -0.6
C2CD3-220ENST00000544293 PLIN4Q96Q06 1357 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 FAM86C2PA6NEL3 165 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
C2CD3-220ENST00000544293 ZEB2O60315 1214 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 NMT2O60551 498 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 PFKMP08237 780 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 STAT2P52630 851 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
C2CD3-220ENST00000544293 TMEM31Q5JXX7 168 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 COPS5Q92905 334 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 HLA-CQ95604 372 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
C2CD3-220ENST00000544293 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
C2CD3-220ENST00000544293 PIEZO1Q92508 2521 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.28□□□□□ -0.6
C2CD3-220ENST00000544293 NFIBO00712 420 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 HMMRO75330 724 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 SUPT20HL2P0C7V6 817 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 SLC1A4P43007 532 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 CHURC1Q8WUH1 139 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 CLEC4DQ8WXI8 215 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 WDR11Q9BZH6 1224 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 ECHDC1Q9NTX5 307 aa11.28□□□□□ -0.6
C2CD3-220ENST00000544293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
C2CD3-220ENST00000544293 TCF20Q9UGU0 1960 aaKnown RBP11.28□□□□□ -0.6
C2CD3-220ENST00000544293 BAZ2AQ9UIF9 1905 aaKnown RBP11.27□□□□□ -0.6
C2CD3-220ENST00000544293 A6NJR5 290 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 ARIH2O95376 493 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 MYL3P08590 195 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 EDNRBP24530 442 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 NSMFQ6X4W1 530 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 DHX38Q92620 1227 aaKnown RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
C2CD3-220ENST00000544293 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
C2CD3-220ENST00000544293 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 ICAM1P05362 532 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 TSPY3P0CV98 308 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 TSPY8P0CW00 308 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 RFC2P35250 354 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 SLC16A2P36021 539 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 TDO2P48775 406 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 DEFB103AP81534 67 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 PPARAQ07869 468 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 NFRKBQ6P4R8 1299 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 BTNL9Q6UXG8 535 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 KAT2BQ92831 832 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 LRRCC1Q9C099 1032 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
C2CD3-220ENST00000544293 NBNO60934 754 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 APPP05067 770 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 FGRP09769 529 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 GNAT2P19087 354 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 WDR5P61964 334 aaKnown RBP11.25□□□□□ -0.61
C2CD3-220ENST00000544293 SLC30A10Q6XR72 485 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 ALYREFQ86V81 257 aaKnown RBP11.25□□□□□ -0.61
C2CD3-220ENST00000544293 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 HCN4Q9Y3Q4 1203 aa11.25□□□□□ -0.61
C2CD3-220ENST00000544293 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 CXCL10P02778 98 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 ACTN1P12814 892 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 ERVK-21P61565 698 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-220ENST00000544293 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 GDF6Q6KF10 455 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-220ENST00000544293 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms