RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 DDX17Q92841 729 aaKnown RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 H3BRJ5 948 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 KCNA4P22459 653 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 IFNA8P32881 189 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 ZC3H12BQ5HYM0 836 aaKnown RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 TRIM59Q8IWR1 403 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 NR1H4Q96RI1 486 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 EFCAB8A8MWE9 144 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 SERPINI2O75830 405 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 TTC19Q6DKK2 380 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-204ENST00000544246 TEX12Q9BXU0 123 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
PCDH9-204ENST00000544246 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
PCDH9-204ENST00000544246 MCF2P10911 925 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 PYGBP11216 843 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 MSH2P43246 934 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 FBXW4P57775 412 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 EFCAB14O75071 495 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
PCDH9-204ENST00000544246 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 SERTAD1Q9UHV2 236 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TMEM191BP0C7N4 346 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 SKIP12755 728 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 ACTN1P12814 892 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 CCT5P48643 541 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 KIF22Q14807 665 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 PTPROQ16827 1216 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TRIML2Q8N7C3 387 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TLK1Q9UKI8 766 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 F8W8V4 182 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 CPA1P15085 419 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 C16orf87Q6PH81 154 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 TMED2Q15363 201 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 CDC26Q8NHZ8 85 aa11.3□□□□□ -0.6
PCDH9-204ENST00000544246 SAMD9Q5K651 1589 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 BLVRAP53004 296 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 IFT88Q13099 833 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 C8orf34Q49A92 452 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 KRT40Q6A162 431 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 GIMAP4Q9NUV9 329 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 DEUP1Q05D60 604 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 ARHGEF18Q6ZSZ5 1173 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 XPO4Q9C0E2 1151 aaKnown RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 TOM1L1O75674 476 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 CHEK2O96017 543 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 POLR2FP61218 127 aaKnown RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 PLEKHM2Q8IWE5 1019 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 SLFN12Q8IYM2 578 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 C8orf58Q8NAV2 365 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 MCTP2Q6DN12 878 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 ABCF3Q9NUQ8 709 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
PCDH9-204ENST00000544246 XKR9Q5GH70 373 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
PCDH9-204ENST00000544246 FAM95CA0A1B0GW59 222 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SLC4A1P02730 911 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 IFNAR2P48551 515 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 GUCY2DQ02846 1103 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 E2F5Q15329 346 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 APPBP2Q92624 585 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 NUDCD1Q96RS6 583 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 DAAM1Q9Y4D1 1078 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 IL2RBP14784 551 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ITGA6P23229 1130 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ANGPTL8Q6UXH0 198 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms