RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 CCDC127Q96BQ5 260 aa15.18■□□□□ 0.02
RPS6KC1-206ENST00000543354 VPS37BQ9H9H4 285 aa15.18■□□□□ 0.02
RPS6KC1-206ENST00000543354 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
RPS6KC1-206ENST00000543354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.18■□□□□ 0.02
RPS6KC1-206ENST00000543354 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
RPS6KC1-206ENST00000543354 LRRN2O75325 713 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 HSPA1LP34931 641 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 LIFRP42702 1097 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 PPP1R21Q6ZMI0 780 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 MB21D1Q8N884 522 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 TXNDC9O14530 226 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 ZNF185O15231 689 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 STAMBPO95630 424 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 NR2F2P24468 414 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 FXR1P51114 621 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 MESDQ14696 234 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 CPSF2Q9P2I0 782 aaKnown RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 PACSIN2Q9UNF0 486 aaPredicted RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 NEDD4P46934 1319 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 MED14O60244 1454 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 RPAINQ86UA6 219 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 FMNL3Q8IVF7 1028 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 SH2D3CQ8N5H7 860 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 DDX12PQ92771 950 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 THOC1Q96FV9 657 aaKnown RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 FNBP1Q96RU3 617 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 CLIC2O15247 247 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 ATP5DP30049 168 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 NDST4Q9H3R1 872 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 TBK1Q9UHD2 729 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
RPS6KC1-206ENST00000543354 CCNE1P24864 410 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 RAD9BQ6WBX8 426 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 MMS22LQ6ZRQ5 1243 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 SRLQ86TD4 932 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 NOA1Q8NC60 698 aaKnown RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 LARP4BQ92615 738 aaKnown RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 N4BP2L2Q92802 583 aaPredicted RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 DYNLL2Q96FJ2 89 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 FEZ2Q9UHY8 353 aaPredicted RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 UBN2Q6ZU65 1347 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 TBC1D1Q86TI0 1168 aaPredicted RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 MB21D2Q8IYB1 491 aaPredicted RBP15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 COA7Q96BR5 231 aa15.16■□□□□ 0.02
RPS6KC1-206ENST00000543354 ATP7BP35670 1465 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 NMT2O60551 498 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 ADCY8P40145 1251 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 PPP2R5AQ15172 486 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 OTUD6AQ7L8S5 288 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 MEIS1O00470 390 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 CIAO1O76071 339 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 USP17L8P0C7I0 530 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 PSMD6Q15008 389 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 WDR66Q8TBY9 1149 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 DHTKD1Q96HY7 919 aaPredicted RBP15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 FUCA2Q9BTY2 467 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 GAS8O95995 478 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 FBXW10Q5XX13 1052 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 KLHL29Q96CT2 875 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 PSTPIP2Q9H939 334 aa15.15■□□□□ 0.02
RPS6KC1-206ENST00000543354 IQGAP1P46940 1657 aa15.14■□□□□ 0.02
RPS6KC1-206ENST00000543354 UNC13BO14795 1591 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 UBE2Q2LH0YL09 131 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 CTDNEP1O95476 244 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 GRIN1Q05586 938 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 SNX1Q13596 522 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 RNF10Q8N5U6 811 aaKnown RBP15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 MMS19Q96T76 1030 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 SMARCAL1Q9NZC9 954 aa15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 ARPP21Q9UBL0 812 aaPredicted RBP15.14■□□□□ 0.01
RPS6KC1-206ENST00000543354 DAAM1Q9Y4D1 1078 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms