RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 DPEP1P16444 411 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 RBM10P98175 930 aaKnown RBP23.1■■□□□ 1.29
ME3-212ENST00000543262 TMEM266Q2M3C6 531 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 FILIP1LQ4L180 1135 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 GIMAP8Q8ND71 665 aaPredicted RBP23.1■■□□□ 1.29
ME3-212ENST00000543262 GMCL1P1Q8NEA9 526 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 TRIM9Q9C026 710 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 ATF5Q9Y2D1 282 aaPredicted RBP23.1■■□□□ 1.29
ME3-212ENST00000543262 SEMA3FQ13275 785 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 C7orf25Q9BPX7 421 aa23.1■■□□□ 1.29
ME3-212ENST00000543262 LIMA1Q9UHB6 759 aaKnown RBP23.1■■□□□ 1.29
ME3-212ENST00000543262 CLRN2A0PK11 232 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L15C9J2P7 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L13C9JLJ4 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L11C9JVI0 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L18D6R9N7 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L22D6RA61 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L17D6RBQ6 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L19D6RCP7 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L20D6RJB6 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 NDUFB10O96000 172 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 VIL1P09327 827 aaKnown RBP23.09■■□□□ 1.29
ME3-212ENST00000543262 PBX1P40424 430 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L24Q0WX57 530 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 GRB10Q13322 594 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 PDIA5Q14554 519 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 KRT31Q15323 416 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 USP17L6PQ6QN14 398 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 GMLQ99445 158 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 DDX25Q9UHL0 483 aaKnown RBP23.09■■□□□ 1.29
ME3-212ENST00000543262 COL4A5P29400 1685 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 LRRC10BA6NIK2 292 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 GMCL1Q96IK5 515 aa23.09■■□□□ 1.29
ME3-212ENST00000543262 BAG1Q99933 345 aaPredicted RBP23.09■■□□□ 1.29
ME3-212ENST00000543262 TRIM49BA6NDI0 452 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 POTEMA6NI47 508 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 CCT6AP40227 531 aaKnown RBP23.08■■□□□ 1.29
ME3-212ENST00000543262 SNAP25P60880 206 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 PNMA5Q96PV4 448 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 RAB34Q9BZG1 259 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 GLT8D2Q9H1C3 349 aa23.08■■□□□ 1.29
ME3-212ENST00000543262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
ME3-212ENST00000543262 ZBTB12Q9Y330 459 aaPredicted RBP23.08■■□□□ 1.29
ME3-212ENST00000543262 AMPD3Q01432 767 aa23.08■■□□□ 1.28
ME3-212ENST00000543262 DLGAP5Q15398 846 aa23.08■■□□□ 1.28
ME3-212ENST00000543262 TCP11X2Q5H9J9 407 aa23.08■■□□□ 1.28
ME3-212ENST00000543262 KCNJ18B7U540 433 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 H7C1D1 291 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 ARHGAP6O43182 974 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 PMS1P54277 932 aaKnown RBP23.07■■□□□ 1.28
ME3-212ENST00000543262 ASIC1P78348 528 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 SPAG1Q07617 926 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 STIM1Q13586 685 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 KCNJ12Q14500 433 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 HAS1Q92839 578 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 BLOC1S4Q9NUP1 217 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 ZNF70Q9UC06 446 aaPredicted RBP23.07■■□□□ 1.28
ME3-212ENST00000543262 HERC5Q9UII4 1024 aaKnown RBP23.07■■□□□ 1.28
ME3-212ENST00000543262 HDAC9Q9UKV0 1011 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 A0A1W2PRG0 241 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 BAG6P46379 1132 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 CREBRFQ8IUR6 639 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 OGFOD1Q8N543 542 aa23.07■■□□□ 1.28
ME3-212ENST00000543262 KIF2AO00139 706 aaPredicted RBP23.06■■□□□ 1.28
ME3-212ENST00000543262 N4BP3O15049 544 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 STX10O60499 249 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 GCFC2P16383 781 aaKnown RBP23.06■■□□□ 1.28
ME3-212ENST00000543262 PDE4DQ08499 809 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 IKQ13123 557 aaPredicted RBP23.06■■□□□ 1.28
ME3-212ENST00000543262 SF3B2Q13435 895 aaKnown RBP23.06■■□□□ 1.28
ME3-212ENST00000543262 SV2BQ7L1I2 683 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 CCDC47Q96A33 483 aaKnown RBP23.06■■□□□ 1.28
ME3-212ENST00000543262 CDK5RAP3Q96JB5 506 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 NUDT12Q9BQG2 462 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 VPS16Q9H269 839 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 EXOC1Q9NV70 894 aa23.06■■□□□ 1.28
ME3-212ENST00000543262 AKR1B15C9JRZ8 316 aaPredicted RBP23.05■■□□□ 1.28
ME3-212ENST00000543262 PSMA7O14818 248 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 CCP110O43303 1012 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 COPB1P53618 953 aaKnown RBP23.05■■□□□ 1.28
ME3-212ENST00000543262 RBL2Q08999 1139 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 PPFIBP1Q86W92 1011 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 IRF2BP1Q8IU81 584 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 GJA10Q969M2 543 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 AMNQ9BXJ7 453 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 TAB2Q9NYJ8 693 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 STK17AQ9UEE5 414 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 BMP3P12645 472 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 SYDE2Q5VT97 1194 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 KRT79Q5XKE5 535 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 FCHSD1Q86WN1 690 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 ANKRD20A12PQ8NF67 263 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 SNX29Q8TEQ0 813 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 FAM151AQ8WW52 585 aa23.05■■□□□ 1.28
ME3-212ENST00000543262 MEIS2O14770 477 aa23.04■■□□□ 1.28
ME3-212ENST00000543262 MARCH6O60337 910 aa23.04■■□□□ 1.28
ME3-212ENST00000543262 STK4Q13043 487 aa23.04■■□□□ 1.28
ME3-212ENST00000543262 MCM6Q14566 821 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms