RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 BICD2Q8TD16 824 aa14.02□□□□□ -0.17
DDX55-210ENST00000543016 USP6NLQ92738 828 aa14.02□□□□□ -0.17
DDX55-210ENST00000543016 CUL5Q93034 780 aa14.02□□□□□ -0.17
DDX55-210ENST00000543016 PSTPIP2Q9H939 334 aa14.02□□□□□ -0.17
DDX55-210ENST00000543016 A1CFQ9NQ94 594 aaKnown RBP14.02□□□□□ -0.17
DDX55-210ENST00000543016 ADD3Q9UEY8 706 aaKnown RBP14.02□□□□□ -0.17
DDX55-210ENST00000543016 CEP350Q5VT06 3117 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 DNAJC25-GNG10A0A024R161 153 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 STXBP3O00186 592 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 CALML3P27482 149 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 ADORA2AP29274 412 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 CTGFP29279 349 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 HSD17B4P51659 736 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 ST3GAL1Q11201 340 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 BECN1Q14457 450 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 NSMFQ6X4W1 530 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 OTOP1Q7RTM1 612 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
DDX55-210ENST00000543016 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
DDX55-210ENST00000543016 APBA2Q99767 749 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 ARHGAP39Q9C0H5 1083 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 ZMYND12Q9H0C1 365 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 C6orf50Q9HD87 102 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 RIC8AQ9NPQ8 531 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 CYP39A1Q9NYL5 469 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
DDX55-210ENST00000543016 hCG_1642624A0A1W2PR95 340 aa14□□□□□ -0.17
DDX55-210ENST00000543016 SMCO2A6NFE2 343 aa14□□□□□ -0.17
DDX55-210ENST00000543016 NFIBO00712 420 aa14□□□□□ -0.17
DDX55-210ENST00000543016 FOSP01100 380 aaPredicted RBP14□□□□□ -0.17
DDX55-210ENST00000543016 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
DDX55-210ENST00000543016 FLT3LGP49771 235 aa14□□□□□ -0.17
DDX55-210ENST00000543016 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
DDX55-210ENST00000543016 BAATQ14032 418 aaPredicted RBP14□□□□□ -0.17
DDX55-210ENST00000543016 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
DDX55-210ENST00000543016 FAM184AQ8NB25 1140 aa14□□□□□ -0.17
DDX55-210ENST00000543016 DNERQ8NFT8 737 aa14□□□□□ -0.17
DDX55-210ENST00000543016 PXYLP1Q8TE99 480 aa14□□□□□ -0.17
DDX55-210ENST00000543016 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
DDX55-210ENST00000543016 MYH6P13533 1939 aa14□□□□□ -0.17
DDX55-210ENST00000543016 OPLAHO14841 1288 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 CFBP00751 764 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
DDX55-210ENST00000543016 ADCY7P51828 1080 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 PRKCZQ05513 592 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 TRIM29Q14134 588 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 ZNF792Q3KQV3 632 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 OLFML2BQ68BL8 750 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 RAET1EQ8TD07 263 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
DDX55-210ENST00000543016 ALG1Q9BT22 464 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 SMC3Q9UQE7 1217 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
DDX55-210ENST00000543016 ASB14A6NK59 587 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 JAK2O60674 1132 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 PDCP20941 246 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 NLRP5P59047 1200 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 AP3B2Q13367 1082 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 FBXO46Q6PJ61 603 aaPredicted RBP13.98□□□□□ -0.17
DDX55-210ENST00000543016 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
DDX55-210ENST00000543016 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 EHMT1Q9H9B1 1298 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 PTPN22Q9Y2R2 807 aa13.98□□□□□ -0.17
DDX55-210ENST00000543016 MGAMO43451 1857 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 MEIS2O14770 477 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 COBLO75128 1261 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 CYP2B6P20813 491 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 TYW1BQ6NUM6 668 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 MAML3Q96JK9 1138 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 C8orf76Q96K31 380 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 VPS54Q9P1Q0 977 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 GABRQQ9UN88 632 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 DOCK3Q8IZD9 2030 aa13.97□□□□□ -0.17
DDX55-210ENST00000543016 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 ADCY3O60266 1144 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 PPFIA3O75145 1194 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 PGK2P07205 417 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.17
DDX55-210ENST00000543016 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
DDX55-210ENST00000543016 CAP1Q01518 475 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX55-210ENST00000543016 MFSD14CQ5VZR4 134 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 REXO1Q8N1G1 1221 aaKnown RBP13.96□□□□□ -0.17
DDX55-210ENST00000543016 MORC4Q8TE76 937 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
DDX55-210ENST00000543016 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms