RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 PACS2Q86VP3 889 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 C2CD5Q86YS7 1000 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 HDAC7Q8WUI4 952 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 PPM1EQ8WY54 764 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 DMGDHQ9UI17 866 aaKnown RBP14.39□□□□□ -0.11
DDX11-223ENST00000542838 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
DDX11-223ENST00000542838 PRPHP41219 470 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 TXNRD1Q16881 649 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
DDX11-223ENST00000542838 DEF6Q9H4E7 631 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 FLT1P17948 1338 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
DDX11-223ENST00000542838 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 PRDX5P30044 214 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 GNAQP50148 359 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 MRPS25P82663 173 aaKnown RBP14.38□□□□□ -0.11
DDX11-223ENST00000542838 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 DAGLBQ8NCG7 672 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 RRP36Q96EU6 259 aaKnown RBP14.38□□□□□ -0.11
DDX11-223ENST00000542838 C7orf25Q9BPX7 421 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 IL17RBQ9NRM6 502 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 CASZ1Q86V15 1759 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 KLRK1P26718 216 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 PPP1R2P41236 205 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 GRM4Q14833 912 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 ERFEQ4G0M1 354 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 FBXO33Q7Z6M2 555 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 SPATA4Q8NEY3 305 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 PLAGL2Q9UPG8 496 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 STXBP3O00186 592 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 OR52Z1P0C646 297 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 IRAK1P51617 712 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 KIF11P52732 1056 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 SLC7A5Q01650 507 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 PPFIA1Q13136 1202 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 CCDC181Q5TID7 509 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 GALNT17Q6IS24 598 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 EFCAB13Q8IY85 973 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 HPS3Q969F9 1004 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 AK8Q96MA6 479 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 OSBPL9Q96SU4 736 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 PSMB7Q99436 277 aa14.38□□□□□ -0.11
DDX11-223ENST00000542838 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 CCNT1O60563 726 aaKnown RBP14.37□□□□□ -0.11
DDX11-223ENST00000542838 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
DDX11-223ENST00000542838 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 LETM2Q2VYF4 491 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 CNNM4Q6P4Q7 775 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 NFRKBQ6P4R8 1299 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 GPIHBP1Q8IV16 184 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 ALS2CR12Q96Q35 445 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 FAM207AQ9NSI2 230 aaPredicted RBP14.37□□□□□ -0.11
DDX11-223ENST00000542838 BARHL2Q9NY43 387 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 HYOU1Q9Y4L1 999 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 CYTH3O43739 400 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 AKR1B10O60218 316 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 PRLRP16471 622 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 CXCR5P32302 372 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 CCT5P48643 541 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 AMPD3Q01432 767 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 ITIH3Q06033 890 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 ZNF572Q7Z3I7 529 aaPredicted RBP14.37□□□□□ -0.11
DDX11-223ENST00000542838 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
DDX11-223ENST00000542838 CAPS2Q9BXY5 557 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 MMRN2Q9H8L6 949 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 SLC39A2Q9NP94 309 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
DDX11-223ENST00000542838 GOLGA8KD6RF30 607 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 EPHB6O15197 1021 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 TCP1P17987 556 aaKnown RBP14.36□□□□□ -0.11
DDX11-223ENST00000542838 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
DDX11-223ENST00000542838 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 RUBCNQ92622 972 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
DDX11-223ENST00000542838 DYNLL2Q96FJ2 89 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 EHD2Q9NZN4 543 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 USP17L3A6NCW0 530 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 USP17L4A6NCW7 530 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 TECP42680 631 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 USP17L1Q7RTZ2 530 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 NDST4Q9H3R1 872 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 JAG2Q9Y219 1238 aa14.36□□□□□ -0.11
DDX11-223ENST00000542838 OPA1O60313 960 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 PAFAH1B1P43034 410 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 EPHB4P54760 987 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
DDX11-223ENST00000542838 ACSBG1Q96GR2 724 aa14.35□□□□□ -0.11
DDX11-223ENST00000542838 RUFY1Q96T51 708 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms