RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
LTBR-210ENST00000542830 MRPL11Q9Y3B7 192 aaKnown RBP20.34■□□□□ 0.85
LTBR-210ENST00000542830 PALM3A6NDB9 673 aaPredicted RBP20.33■□□□□ 0.85
LTBR-210ENST00000542830 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 ASGR1P07306 291 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 TOX2Q96NM4 488 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 MTA3Q9BTC8 594 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 VAT1LQ9HCJ6 419 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 PDLIM7Q9NR12 457 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 MAD2L2Q9UI95 211 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 TAF6LQ9Y6J9 622 aa20.33■□□□□ 0.85
LTBR-210ENST00000542830 LRRC37A2A6NM11 1700 aa20.33■□□□□ 0.84
LTBR-210ENST00000542830 MROH7Q68CQ1 1323 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 ZEB2O60315 1214 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 CLTBP09497 229 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 SMPD1P17405 629 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 PDE4DQ08499 809 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 GRM4Q14833 912 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 TMEM67Q5HYA8 995 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 ANKRD33Q7Z3H0 272 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 MB21D2Q8IYB1 491 aaPredicted RBP20.32■□□□□ 0.84
LTBR-210ENST00000542830 AMNQ9BXJ7 453 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 PDGFCQ9NRA1 345 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 PCDH10Q9P2E7 1040 aa20.32■□□□□ 0.84
LTBR-210ENST00000542830 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
LTBR-210ENST00000542830 DCDC2CA8MYV0 355 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 CTAGE5O15320 804 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 PQBP1O60828 265 aaKnown RBP20.31■□□□□ 0.84
LTBR-210ENST00000542830 EDNRBP24530 442 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 TRAF1Q13077 416 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 FSCN1Q16658 493 aaKnown RBP20.31■□□□□ 0.84
LTBR-210ENST00000542830 LRIT3Q3SXY7 679 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 CHST3Q7LGC8 479 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 VTI1AQ96AJ9 217 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 ANO2Q9NQ90 1003 aa20.31■□□□□ 0.84
LTBR-210ENST00000542830 A0A0U1RQG5 324 aaPredicted RBP20.3■□□□□ 0.84
LTBR-210ENST00000542830 RBM47A0AV96 593 aaKnown RBP20.3■□□□□ 0.84
LTBR-210ENST00000542830 ZBTB5O15062 677 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
LTBR-210ENST00000542830 CABYRO75952 493 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
LTBR-210ENST00000542830 TROAPQ12815 778 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 CCDC136Q96JN2 1154 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
LTBR-210ENST00000542830 TRIM43BA6NCK2 446 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 SLC27A2O14975 620 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 KIAA0355O15063 1070 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 MCM5P33992 734 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 ANTXR2P58335 489 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 BEX3Q00994 111 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
LTBR-210ENST00000542830 NSUN6Q8TEA1 469 aaKnown RBP20.29■□□□□ 0.84
LTBR-210ENST00000542830 TRIM43Q96BQ3 446 aaPredicted RBP20.29■□□□□ 0.84
LTBR-210ENST00000542830 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 SEZ6LQ9BYH1 1024 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 SENP2Q9HC62 589 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 TMEM39AQ9NV64 488 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 MYH6P13533 1939 aa20.29■□□□□ 0.84
LTBR-210ENST00000542830 ARVCFO00192 962 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
LTBR-210ENST00000542830 CDK7P50613 346 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 RNF20Q5VTR2 975 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 SH3RF1Q7Z6J0 888 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 SKAP1Q86WV1 359 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 SCFD2Q8WU76 684 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 BADQ92934 168 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 TMEM87BQ96K49 555 aa20.28■□□□□ 0.84
LTBR-210ENST00000542830 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
LTBR-210ENST00000542830 LTBP2Q14767 1821 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 PRC1O43663 620 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 CDC45O75419 566 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 DDAH1O94760 285 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 RAG1P15918 1043 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 FAAP100Q0VG06 881 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 GPR153Q6NV75 609 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 TBC1D5Q92609 795 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 IWS1Q96ST2 819 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 LY9Q9HBG7 655 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
LTBR-210ENST00000542830 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
LTBR-210ENST00000542830 TLR3O15455 904 aaKnown RBP20.26■□□□□ 0.83
LTBR-210ENST00000542830 CFBP00751 764 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 KIF5BP33176 963 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 CPT1AP50416 773 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 GHRHRQ02643 423 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 BRDTQ58F21 947 aaPredicted RBP20.26■□□□□ 0.83
LTBR-210ENST00000542830 CXCL17Q6UXB2 119 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms