RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 STRNO43815 780 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 FKTNO75072 461 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 PGK2P07205 417 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 ADORA2AP29274 412 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 DEKP35659 375 aaKnown RBP12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 FOSBP53539 338 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 PKP1Q13835 747 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 RASGRP4Q8TDF6 673 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 CRYGNQ8WXF5 182 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 PSTPIP2Q9H939 334 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 TMEM260Q9NX78 707 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 FBXO40Q9UH90 709 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 FRMPD4Q14CM0 1322 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 ZNF236Q9UL36 1845 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 MGAMO43451 1857 aa12.28□□□□□ -0.44
NPIPB3-210ENST00000542817 SLC15A5A6NIM6 579 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 KIF28PB7ZC32 967 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 MMP1P03956 469 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 HOXC6P09630 235 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 SYT1P21579 422 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 RPTORQ8N122 1335 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 WASF1Q92558 559 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 C8orf76Q96K31 380 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 MMP19Q99542 508 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 MAF1Q9H063 256 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 FLRT1Q9NZU1 646 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 PCDHA4Q9UN74 947 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 MTMR6Q9Y217 621 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 ZDHHC9Q9Y397 364 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.45
NPIPB3-210ENST00000542817 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 DNAH12Q6ZR08 3092 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 GCOM1H8Y6P7 765 aaPredicted RBP12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 CFBP00751 764 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 FCER1AP12319 257 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 ADCY7P51828 1080 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 FCGRTP55899 365 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 PRKCZQ05513 592 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 TRAF1Q13077 416 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 NR5A1Q13285 461 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 BECN1Q14457 450 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 BLIDQ8IZY5 108 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 CUL5Q93034 780 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 MAP3K20Q9NYL2 800 aaKnown RBP12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 MKI67P46013 3256 aaKnown RBP12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 CASP8AP2Q9UKL3 1982 aa12.26□□□□□ -0.45
NPIPB3-210ENST00000542817 PFASO15067 1338 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 WNT7AO00755 349 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 EDNRBP24530 442 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 CALML3P27482 149 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 ANP32AP39687 249 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 MRPL12P52815 198 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 LBX1P52954 281 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 NLRP5P59047 1200 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 WDR78Q5VTH9 848 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 LARP1BQ659C4 914 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 SAMD3Q8N6K7 520 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 FAM184AQ8NB25 1140 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 IL31RAQ8NI17 732 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 MORC4Q8TE76 937 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 PGBD1Q96JS3 809 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 SRRDQ9UH36 339 aa12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 RBBP6Q7Z6E9 1792 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-210ENST00000542817 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 FLT3LGP49771 235 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 KCTD2Q14681 263 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 CCL14Q16627 93 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 JAKMIP3Q5VZ66 844 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 OTOP1Q7RTM1 612 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 CCDC12Q8WUD4 166 aaPredicted RBP12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 C6orf50Q9HD87 102 aa12.24□□□□□ -0.45
NPIPB3-210ENST00000542817 DIS3Q9Y2L1 958 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms