RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CT47B1P0C2W7 299 aaPredicted RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 ITGA4P13612 1032 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 HOXA10P31260 410 aaPredicted RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 NTF4P34130 210 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 GFRA1P56159 465 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 NKG7Q16617 165 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 CPSF6Q16630 551 aaKnown RBP eCLIP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 PTPN21Q16825 1174 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 SGO2Q562F6 1265 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 NUTM2GQ5VZR2 741 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 IQSEC1Q6DN90 963 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 CXorf57Q6NSI4 855 aaKnown RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 ZCCHC8Q6NZY4 707 aaKnown RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 C11orf96Q7Z7L8 435 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 WNK4Q96J92 1243 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 TMPRSS13Q9BYE2 586 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 CYP4F12Q9HCS2 524 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 ATG3Q9NT62 314 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 BSDC1Q9NW68 430 aaPredicted RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 CGGBP1Q9UFW8 167 aaPredicted RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 ADGRE2Q9UHX3 823 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 VSTM5A8MXK1 200 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 M0R2C6 588 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 SHOXO15266 292 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 TMPRSS2O15393 492 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 PRKD3O94806 890 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 KCNH1O95259 989 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 SNRPB2P08579 225 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 U2AF1L5P0DN76 240 aaPredicted RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 RXRBP28702 533 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 KCNJ6P48051 423 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 PURAQ00577 322 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 U2AF1Q01081 240 aaKnown RBP eCLIP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 GRB10Q13322 594 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 TCIRG1Q13488 830 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 SF1Q15637 639 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 ZRSR2Q15696 482 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 NTRK3Q16288 839 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 ABCB5Q2M3G0 1257 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 SKOR2Q2VWA4 1001 aaPredicted RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 HSP90AB4PQ58FF6 505 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 PRAMEF13Q5VWM6 474 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 CDC37L1Q7L3B6 337 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 C7orf61Q8IZ16 206 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 ARHGEF39Q8N4T4 335 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 C12orf50Q8NA57 414 aaPredicted RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 KCT2Q8NC54 265 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 SMG8Q8ND04 991 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 RNF214Q8ND24 703 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 FBXO41Q8TF61 875 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 BRF1Q92994 677 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 MENTQ9BUN1 341 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 GP6Q9HCN6 339 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 OBP2AQ9NY56 170 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 ANGEL1Q9UNK9 670 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 LUC7L2Q9Y383 392 aaKnown RBP5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 TRAF6Q9Y4K3 522 aa5.04□□□□□ -1.6
SFSWAP-211ENST00000542813 CCDC189A1A4V9 331 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 ZNF891A8MT65 544 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 AQP7O14520 342 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 TIAF1O95411 115 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 CRTAMO95727 393 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 DLGAP3O95886 979 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 F2P00734 622 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 CST3P01034 146 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 FOSP01100 380 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 F13BP05160 661 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 MYBL2P10244 700 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 FOSL1P15407 271 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 PDE6BP35913 854 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 CAP2P40123 477 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 IL2P60568 153 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 RNF4P78317 190 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 SLBPQ14493 270 aaKnown RBP eCLIP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 C10orf62Q5T681 223 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 NBPF12Q5TAG4 269 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 GTF2IRD2BQ6EKJ0 949 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 DDX53Q86TM3 631 aaKnown RBP5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 GTF2IRD2Q86UP8 949 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 KIF18BQ86Y91 864 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 FBXL6Q8N531 539 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 TMEM145Q8NBT3 493 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 OSBPL1AQ9BXW6 950 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 CRIM1Q9NZV1 1036 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 SAMD15Q9P1V8 674 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
SFSWAP-211ENST00000542813 A0A087WZG4 1122 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 FAM95CA0A1B0GW59 222 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 K7ESF4 209 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 SNUPNO95149 360 aaKnown RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 IFIT2P09913 472 aaKnown RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 NBPF7P0C2Y1 421 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms