RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 NFXL1Q6ZNB6 911 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 DNERQ8NFT8 737 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 CTCFLQ8NI51 663 aaPredicted RBP17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 PIGSQ96S52 555 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 SPZ1Q9BXG8 430 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 SNX14Q9Y5W7 946 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 SYNRGQ9UMZ2 1314 aa17.95■□□□□ 0.46
ECHDC2-223ENST00000542552 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 HMGB1P09429 215 aaKnown RBP17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 CALM1P0DP23 149 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 CALM2P0DP24 149 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 CALM3P0DP25 149 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 KIF5BP33176 963 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 NKX3-2P78367 333 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 LRRC26Q2I0M4 334 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 RNF180Q86T96 592 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 MCF2L2Q86YR7 1114 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 KLHDC9Q8NEP7 349 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 SYTL5Q8TDW5 730 aaPredicted RBP17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 LZTS2Q9BRK4 669 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 VTA1Q9NP79 307 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 PHF24Q9UPV7 400 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 PCDHA1Q9Y5I3 950 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
ECHDC2-223ENST00000542552 ADCYAP1R1P41586 468 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 GNAQP50148 359 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 HSD17B4P51659 736 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 GJA9P57773 515 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 TRAF1Q13077 416 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 CCSAPQ6IQ19 270 aaPredicted RBP17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 TSEN34Q9BSV6 310 aaKnown RBP17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 PDGFCQ9NRA1 345 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 GNEQ9Y223 722 aaKnown RBP17.93■□□□□ 0.46
ECHDC2-223ENST00000542552 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 CTAGE5O15320 804 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 PLEKHA8P1O95397 391 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 IQSEC1Q6DN90 963 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 FBXO16Q8IX29 292 aaPredicted RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 SRBD1Q8N5C6 995 aaKnown RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 SAMD3Q8N6K7 520 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 FANCBQ8NB91 859 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 USP26Q9BXU7 913 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 MAP3K20Q9NYL2 800 aaKnown RBP17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
ECHDC2-223ENST00000542552 MYADML2A6NDP7 307 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 RXRAP19793 462 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 SNX17Q15036 470 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 C1orf53Q5VUE5 145 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 SLC39A5Q6ZMH5 540 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 EEPD1Q7L9B9 569 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 C7orf61Q8IZ16 206 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 TAAR1Q96RJ0 339 aa17.91■□□□□ 0.46
ECHDC2-223ENST00000542552 CPA1P15085 419 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 SMPD1P17405 629 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 IRX5P78411 483 aaPredicted RBP17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 PDE4DQ08499 809 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 TMEM63BQ5T3F8 832 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 TMTC3Q6ZXV5 915 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 NSUN6Q8TEA1 469 aaKnown RBP17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 IWS1Q96ST2 819 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 MPHOSPH6Q99547 160 aaKnown RBP17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 Q9Y3F1 56 aa17.9■□□□□ 0.46
ECHDC2-223ENST00000542552 MOXD2PA6NHM9 499 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 B4DLN1 442 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 CFBP00751 764 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 ACLYP53396 1101 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 KCNA10Q16322 511 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 RAB11FIP4Q86YS3 637 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 FERMT2Q96AC1 680 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 RMDN3Q96TC7 470 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 SPC25Q9HBM1 224 aa17.89■□□□□ 0.45
ECHDC2-223ENST00000542552 A0A1W2PQ45 241 aaPredicted RBP17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 A0A1W2PQY0 241 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 ZBTB43O43298 467 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 C6orf222P0C671 652 aaPredicted RBP17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 RCAN1P53805 252 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 FUT2Q10981 343 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 DUSP28Q4G0W2 176 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 BLOC1S2Q6QNY1 142 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 TLK2Q86UE8 772 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms