RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 WDR18Q9BV38 432 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 A0A087X0B3 334 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 TDP2O95551 362 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 USP14P54578 494 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 BACE1P56817 501 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 ANP32BQ92688 251 aaKnown RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 DHX58Q96C10 678 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 OPLAHO14841 1288 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 FOXN1O15353 648 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 OR52Z1P0C646 297 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 VCAM1P19320 739 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 HOXA13P31271 388 aaPredicted RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 TRAF1Q13077 416 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 PNOCQ13519 176 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 E2F4Q16254 413 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCG3-202ENST00000542355 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
SCG3-202ENST00000542355 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 SSC5DA1L4H1 1573 aa12.49□□□□□ -0.41
SCG3-202ENST00000542355 BIN1O00499 593 aa12.48□□□□□ -0.41
SCG3-202ENST00000542355 SLC37A4O43826 429 aa12.48□□□□□ -0.41
SCG3-202ENST00000542355 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
SCG3-202ENST00000542355 FLOT1O75955 427 aa12.48□□□□□ -0.41
SCG3-202ENST00000542355 PRPHP41219 470 aa12.48□□□□□ -0.41
SCG3-202ENST00000542355 ZRSR1Q15695 479 aaKnown RBP12.48□□□□□ -0.41
SCG3-202ENST00000542355 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
SCG3-202ENST00000542355 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
SCG3-202ENST00000542355 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
SCG3-202ENST00000542355 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
SCG3-202ENST00000542355 PP2D1A8MPX8 630 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 CFBP00751 764 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 TECP42680 631 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 TXKP42681 527 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 ZNF165P49910 485 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 STX1AQ16623 288 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 ISM2Q6H9L7 571 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 FAM200AQ8TCP9 573 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 TBC1D5Q92609 795 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 HMGCS2P54868 508 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 MDM2Q00987 491 aaPredicted RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 VGLL4Q14135 290 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 CALCRLQ16602 461 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 NOL9Q5SY16 702 aaKnown RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
SCG3-202ENST00000542355 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
SCG3-202ENST00000542355 C19orf81C9J6K1 198 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 FOSP01100 380 aaPredicted RBP12.46□□□□□ -0.41
SCG3-202ENST00000542355 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 TXLNAP40222 546 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 UBA7P41226 1012 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 USP11P51784 963 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 POSTNQ15063 836 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 KANK3Q6NY19 840 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 C11orf57Q6ZUT1 292 aaPredicted RBP12.46□□□□□ -0.41
SCG3-202ENST00000542355 LUZP1Q86V48 1076 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
SCG3-202ENST00000542355 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 AFG3L2Q9Y4W6 797 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 ZNF536O15090 1300 aa12.46□□□□□ -0.41
SCG3-202ENST00000542355 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
SCG3-202ENST00000542355 PIK3CDO00329 1044 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 ICAM1P05362 532 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 PRR29P0C7W0 189 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 AFMP43652 599 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 KARSQ15046 597 aaKnown RBP12.46□□□□□ -0.42
SCG3-202ENST00000542355 IQUBQ8NA54 791 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.42
SCG3-202ENST00000542355 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.42
SCG3-202ENST00000542355 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 POTECB2RU33 542 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 GCOM1H8Y6P7 765 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms