RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 USP17L21D6R901 530 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 BCAR3O75815 825 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 OAZ1P54368 228 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 BFSP2Q13515 415 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 HERC4Q5GLZ8 1057 aaPredicted RBP18.82■□□□□ 0.6
PAAF1-211ENST00000542293 KIAA1211Q6ZU35 1233 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 C17orf80Q9BSJ5 609 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 MTG1Q9BT17 334 aaPredicted RBP18.82■□□□□ 0.6
PAAF1-211ENST00000542293 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
PAAF1-211ENST00000542293 ACAD9Q9H845 621 aa18.82■□□□□ 0.6
PAAF1-211ENST00000542293 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 DUSP28Q4G0W2 176 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 PABPC5Q96DU9 382 aaKnown RBP18.81■□□□□ 0.6
PAAF1-211ENST00000542293 MRPL38Q96DV4 380 aaKnown RBP18.81■□□□□ 0.6
PAAF1-211ENST00000542293 ATP8A2Q9NTI2 1148 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 FAM86C1Q9NVL1 165 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 COG6Q9Y2V7 657 aa18.81■□□□□ 0.6
PAAF1-211ENST00000542293 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
PAAF1-211ENST00000542293 COL19A1Q14993 1142 aa18.8■□□□□ 0.6
PAAF1-211ENST00000542293 BMP8AQ7Z5Y6 402 aa18.8■□□□□ 0.6
PAAF1-211ENST00000542293 TRMT2AQ8IZ69 625 aaKnown RBP18.8■□□□□ 0.6
PAAF1-211ENST00000542293 ALG13Q9NP73 1137 aaKnown RBP18.8■□□□□ 0.6
PAAF1-211ENST00000542293 RNF146Q9NTX7 359 aa18.8■□□□□ 0.6
PAAF1-211ENST00000542293 NYAP2Q9P242 653 aa18.8■□□□□ 0.6
PAAF1-211ENST00000542293 FAM50BQ9Y247 325 aa18.8■□□□□ 0.6
PAAF1-211ENST00000542293 MBD4O95243 580 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
PAAF1-211ENST00000542293 LRRFIP1Q32MZ4 808 aaKnown RBP18.79■□□□□ 0.6
PAAF1-211ENST00000542293 TCEAL5Q5H9L2 206 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 FAM117BQ6P1L5 589 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 EP400NLQ6ZTU2 488 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 RNF135Q8IUD6 432 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 EDAQ92838 391 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 PURBQ96QR8 312 aaKnown RBP18.79■□□□□ 0.6
PAAF1-211ENST00000542293 VTA1Q9NP79 307 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 FEM1BQ9UK73 627 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 PLXNA3P51805 1871 aa18.79■□□□□ 0.6
PAAF1-211ENST00000542293 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
PAAF1-211ENST00000542293 CPT1AP50416 773 aa18.78■□□□□ 0.6
PAAF1-211ENST00000542293 CNKSR3Q6P9H4 555 aa18.78■□□□□ 0.6
PAAF1-211ENST00000542293 CTAGE1Q96RT6 745 aa18.78■□□□□ 0.6
PAAF1-211ENST00000542293 PRRX2Q99811 253 aa18.78■□□□□ 0.6
PAAF1-211ENST00000542293 ATG2AQ2TAZ0 1938 aa18.78■□□□□ 0.6
PAAF1-211ENST00000542293 LTBRP36941 435 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 RARSP54136 660 aaKnown RBP18.77■□□□□ 0.6
PAAF1-211ENST00000542293 TIGD5Q53EQ6 642 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 AMOTL1Q8IY63 956 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 MORC4Q8TE76 937 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 PBXIP1Q96AQ6 731 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 GPHNQ9NQX3 736 aaPredicted RBP18.77■□□□□ 0.6
PAAF1-211ENST00000542293 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
PAAF1-211ENST00000542293 MYO7AQ13402 2215 aa18.77■□□□□ 0.59
PAAF1-211ENST00000542293 DCHS1Q96JQ0 3298 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 TMEM221A6NGB7 291 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 M0R296 226 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 NBNO60934 754 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 CXCL10P02778 98 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 TRIM27P14373 513 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 RASA1P20936 1047 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 PTPN11Q06124 597 aaPredicted RBP18.76■□□□□ 0.59
PAAF1-211ENST00000542293 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 WDR11Q9BZH6 1224 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 CLDND1Q9NY35 253 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 CACNA1HO95180 2353 aa18.76■□□□□ 0.59
PAAF1-211ENST00000542293 PTPRZ1P23471 2315 aaPredicted RBP18.75■□□□□ 0.59
PAAF1-211ENST00000542293 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 ABHD14A-ACY1A0A1B0GW23 586 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 GOLIM4O00461 696 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 SMAD2Q15796 467 aaKnown RBP18.75■□□□□ 0.59
PAAF1-211ENST00000542293 PTPROQ16827 1216 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 TRIM67Q6ZTA4 783 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 AACSQ86V21 672 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 OR6J1Q8NGC5 347 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 DHX38Q92620 1227 aaKnown RBP18.75■□□□□ 0.59
PAAF1-211ENST00000542293 CYP39A1Q9NYL5 469 aa18.75■□□□□ 0.59
PAAF1-211ENST00000542293 MICAL3Q7RTP6 2002 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 ALAS1P13196 640 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 SELPP16109 830 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 PTGISQ16647 500 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 EPC2Q52LR7 807 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 LRRC8DQ7L1W4 858 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 C1orf115Q9H7X2 142 aa18.74■□□□□ 0.59
PAAF1-211ENST00000542293 NLRC5Q86WI3 1866 aa18.73■□□□□ 0.59
PAAF1-211ENST00000542293 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
PAAF1-211ENST00000542293 MBTPS2O43462 519 aa18.73■□□□□ 0.59
PAAF1-211ENST00000542293 CHGBP05060 677 aa18.73■□□□□ 0.59
PAAF1-211ENST00000542293 FDX1P10109 184 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms