RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RBM47A0AV96 593 aaKnown RBP31.69■■■□□ 2.66
CHFR-218ENST00000540963 ATP2A2P16615 1042 aaKnown RBP31.69■■■□□ 2.66
CHFR-218ENST00000540963 CPT1AP50416 773 aa31.69■■■□□ 2.66
CHFR-218ENST00000540963 BTNL9Q6UXG8 535 aa31.69■■■□□ 2.66
CHFR-218ENST00000540963 ANAPC4Q9UJX5 808 aa31.69■■■□□ 2.66
CHFR-218ENST00000540963 PNMA2Q9UL42 364 aa31.69■■■□□ 2.66
CHFR-218ENST00000540963 POU3F3P20264 500 aaPredicted RBP31.68■■■□□ 2.66
CHFR-218ENST00000540963 PTGS1P23219 599 aa31.68■■■□□ 2.66
CHFR-218ENST00000540963 RABGGTBP53611 331 aa31.68■■■□□ 2.66
CHFR-218ENST00000540963 PURAQ00577 322 aaKnown RBP31.68■■■□□ 2.66
CHFR-218ENST00000540963 AAK1Q2M2I8 961 aa31.68■■■□□ 2.66
CHFR-218ENST00000540963 DDX49Q9Y6V7 483 aaKnown RBP31.68■■■□□ 2.66
CHFR-218ENST00000540963 BDP1A6H8Y1 2624 aa31.68■■■□□ 2.66
CHFR-218ENST00000540963 SCN10AQ9Y5Y9 1956 aa31.68■■■□□ 2.66
CHFR-218ENST00000540963 RFC2P35250 354 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 ALDH5A1P51649 535 aaPredicted RBP31.67■■■□□ 2.66
CHFR-218ENST00000540963 SNAP25P60880 206 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 TMEM63BQ5T3F8 832 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 SCLYQ96I15 445 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 WDR11Q9BZH6 1224 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 REV3LO60673 3130 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 TNKSO95271 1327 aa31.67■■■□□ 2.66
CHFR-218ENST00000540963 ZBBXA8MT70 800 aa31.66■■■□□ 2.66
CHFR-218ENST00000540963 ORC4O43929 436 aa31.66■■■□□ 2.66
CHFR-218ENST00000540963 BAATQ14032 418 aaPredicted RBP31.66■■■□□ 2.66
CHFR-218ENST00000540963 FOXP2O15409 715 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 NMT2O60551 498 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 FGRP09769 529 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 ACTN1P12814 892 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 BRDTQ58F21 947 aaPredicted RBP31.65■■■□□ 2.66
CHFR-218ENST00000540963 TMEM67Q5HYA8 995 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 CHMP4CQ96CF2 233 aa31.65■■■□□ 2.66
CHFR-218ENST00000540963 MTG1Q9BT17 334 aaPredicted RBP31.65■■■□□ 2.66
CHFR-218ENST00000540963 GPHNQ9NQX3 736 aaPredicted RBP31.65■■■□□ 2.66
CHFR-218ENST00000540963 TRMT13Q9NUP7 481 aaKnown RBP31.65■■■□□ 2.66
CHFR-218ENST00000540963 NKRFO15226 690 aaKnown RBP eCLIP31.64■■■□□ 2.66
CHFR-218ENST00000540963 KPNA6O60684 536 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 CTDSPL2Q05D32 466 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 CCDC96Q2M329 555 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 PHOSPHO2Q8TCD6 241 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 PURBQ96QR8 312 aaKnown RBP31.64■■■□□ 2.66
CHFR-218ENST00000540963 MPHOSPH6Q99547 160 aaKnown RBP31.64■■■□□ 2.66
CHFR-218ENST00000540963 RAD50Q92878 1312 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 SCN5AQ14524 2016 aa31.64■■■□□ 2.66
CHFR-218ENST00000540963 PITPNM1O00562 1244 aa31.63■■■□□ 2.65
CHFR-218ENST00000540963 RANBP6O60518 1105 aaKnown RBP31.63■■■□□ 2.65
CHFR-218ENST00000540963 MYOGP15173 224 aa31.63■■■□□ 2.65
CHFR-218ENST00000540963 TTLL4Q14679 1199 aa31.63■■■□□ 2.65
CHFR-218ENST00000540963 NFRKBQ6P4R8 1299 aa31.63■■■□□ 2.65
CHFR-218ENST00000540963 SLC9A7Q96T83 725 aa31.63■■■□□ 2.65
CHFR-218ENST00000540963 CYP2C9P11712 490 aa31.62■■■□□ 2.65
CHFR-218ENST00000540963 BMP1P13497 986 aa31.62■■■□□ 2.65
CHFR-218ENST00000540963 PTPN11Q06124 597 aaPredicted RBP31.62■■■□□ 2.65
CHFR-218ENST00000540963 SYDE2Q5VT97 1194 aa31.62■■■□□ 2.65
CHFR-218ENST00000540963 RASGRP2Q7LDG7 609 aa31.62■■■□□ 2.65
CHFR-218ENST00000540963 TANC1Q9C0D5 1861 aa31.62■■■□□ 2.65
CHFR-218ENST00000540963 TCF20Q9UGU0 1960 aaKnown RBP31.61■■■□□ 2.65
CHFR-218ENST00000540963 NFIBO00712 420 aa31.61■■■□□ 2.65
CHFR-218ENST00000540963 ALX1Q15699 326 aa31.61■■■□□ 2.65
CHFR-218ENST00000540963 OR6J1Q8NGC5 347 aa31.61■■■□□ 2.65
CHFR-218ENST00000540963 INCENPQ9NQS7 918 aa31.61■■■□□ 2.65
CHFR-218ENST00000540963 XIRP2A4UGR9 3374 aa31.6■■■□□ 2.65
CHFR-218ENST00000540963 GTPBP6O43824 516 aaPredicted RBP31.6■■■□□ 2.65
CHFR-218ENST00000540963 MYL3P08590 195 aa31.6■■■□□ 2.65
CHFR-218ENST00000540963 TOP1P11387 765 aaKnown RBP31.6■■■□□ 2.65
CHFR-218ENST00000540963 DNERQ8NFT8 737 aa31.6■■■□□ 2.65
CHFR-218ENST00000540963 TCP11L1Q9NUJ3 509 aa31.6■■■□□ 2.65
CHFR-218ENST00000540963 PRRC2BQ5JSZ5 2229 aaKnown RBP31.6■■■□□ 2.65
CHFR-218ENST00000540963 PTPDC1A2A3K4 754 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 MX1P20591 662 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 SLC16A2P36021 539 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 PPP2R5BQ15173 497 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 TTBK2Q6IQ55 1244 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 DEFB128Q7Z7B8 93 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 SCFD2Q8WU76 684 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 MTMR7Q9Y216 660 aa31.59■■■□□ 2.65
CHFR-218ENST00000540963 A6NJR5 290 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 B4DLN1 442 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 CA3P07451 260 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 EDNRBP24530 442 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 MRPL12P52815 198 aaKnown RBP31.58■■■□□ 2.65
CHFR-218ENST00000540963 NBPF20Q3BBV1 942 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 RNF207Q6ZRF8 634 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 RETREG2Q8NC44 543 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 CLEC4DQ8WXI8 215 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 MTCH2Q9Y6C9 303 aa31.58■■■□□ 2.65
CHFR-218ENST00000540963 WDR19Q8NEZ3 1342 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 IQCF3P0C7M6 154 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 PDE4DQ08499 809 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 MICALL1Q8N3F8 863 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 TMEM47Q9BQJ4 181 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 C1QTNF1Q9BXJ1 281 aa31.57■■■□□ 2.64
CHFR-218ENST00000540963 BFSP2Q13515 415 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 FAM47CQ5HY64 1035 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 SLC30A10Q6XR72 485 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 TICAM2Q86XR7 235 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 OTUD7AQ8TE49 926 aaPredicted RBP31.56■■■□□ 2.64
CHFR-218ENST00000540963 MAF1Q9H063 256 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 COG5Q9UP83 839 aa31.56■■■□□ 2.64
CHFR-218ENST00000540963 KIF28PB7ZC32 967 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms