RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RARBP10826 455 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 SMARCA1P28370 1054 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 GHRHRQ02643 423 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 GJC2Q5T442 439 aaPredicted RBP19.6■□□□□ 0.73
CD9-209ENST00000540891 BLOC1S2Q6QNY1 142 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 HTATIP2Q9BUP3 242 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 MAF1Q9H063 256 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 XPNPEP3Q9NQH7 507 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 ADD3Q9UEY8 706 aaKnown RBP19.6■□□□□ 0.73
CD9-209ENST00000540891 FAM184BQ9ULE4 1060 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 BAZ2BQ9UIF8 2168 aaKnown RBP19.6■□□□□ 0.73
CD9-209ENST00000540891 LOC102724159A0A0B4J2E5 919 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 ADAMTS4O75173 837 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 PGK1P00558 417 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 RPS6KB1P23443 525 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 EDNRBP24530 442 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 GNAQP50148 359 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 PWP2Q15269 919 aaKnown RBP19.59■□□□□ 0.73
CD9-209ENST00000540891 LRRC41Q15345 812 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 Q6ZUG5 572 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 TMTC3Q6ZXV5 915 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 MCF2L2Q86YR7 1114 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 FBXO16Q8IX29 292 aaPredicted RBP19.59■□□□□ 0.73
CD9-209ENST00000540891 PIBF1Q8WXW3 757 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 LZTS2Q9BRK4 669 aa19.59■□□□□ 0.73
CD9-209ENST00000540891 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.58■□□□□ 0.72
CD9-209ENST00000540891 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.72
CD9-209ENST00000540891 HSD17B4P51659 736 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 TAPT1Q6NXT6 567 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 EEPD1Q7L9B9 569 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 FBXL16Q8N461 479 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 ARRDC4Q8NCT1 418 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 DNERQ8NFT8 737 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 TAAR1Q96RJ0 339 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 AGXT2Q9BYV1 514 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 PDGFCQ9NRA1 345 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 ALPK3Q96L96 1907 aa19.58■□□□□ 0.72
CD9-209ENST00000540891 SYNRGQ9UMZ2 1314 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 KLF18A0A0U1RQI7 1052 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 DUSP11O75319 330 aaKnown RBP19.57■□□□□ 0.72
CD9-209ENST00000540891 PSMA5P28066 241 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 ADCYAP1R1P41586 468 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 IRX5P78411 483 aaPredicted RBP19.57■□□□□ 0.72
CD9-209ENST00000540891 TMEM63BQ5T3F8 832 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 PRPF38BQ5VTL8 546 aaKnown RBP19.57■□□□□ 0.72
CD9-209ENST00000540891 SYNE3Q6ZMZ3 975 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 DPF3Q92784 378 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 ZSWIM6Q9HCJ5 1215 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 VTA1Q9NP79 307 aa19.57■□□□□ 0.72
CD9-209ENST00000540891 FAM217BQ9NTX9 383 aaPredicted RBP19.57■□□□□ 0.72
CD9-209ENST00000540891 MYADML2A6NDP7 307 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 ZBTB43O43298 467 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 CFBP00751 764 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 PTGS1P23219 599 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 FUT2Q10981 343 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 KLHDC9Q8NEP7 349 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 BRF1Q92994 677 aa19.56■□□□□ 0.72
CD9-209ENST00000540891 RRP36Q96EU6 259 aaKnown RBP19.56■□□□□ 0.72
CD9-209ENST00000540891 GNEQ9Y223 722 aaKnown RBP19.56■□□□□ 0.72
CD9-209ENST00000540891 CNTNAP5Q8WYK1 1306 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
CD9-209ENST00000540891 SMPD1P17405 629 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 CDC27P30260 824 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 RCAN1P53805 252 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 TRAF1Q13077 416 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 RTN1Q16799 776 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 RUFY3Q7L099 469 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 CCDC82Q8N4S0 544 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
CD9-209ENST00000540891 SENP6Q9GZR1 1112 aaPredicted RBP19.55■□□□□ 0.72
CD9-209ENST00000540891 UPF3AQ9H1J1 476 aaKnown RBP19.55■□□□□ 0.72
CD9-209ENST00000540891 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
CD9-209ENST00000540891 hCG_1642624A0A1W2PR95 340 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 GOLGA8AA7E2F4 631 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 GOLGA8BA8MQT2 603 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 KBTBD13C9JR72 458 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 CTAGE5O15320 804 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 SEC24BO95487 1268 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 HOXA13P31271 388 aaPredicted RBP19.54■□□□□ 0.72
CD9-209ENST00000540891 GJA9P57773 515 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 NKX3-2P78367 333 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 FGD1P98174 961 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 TNFAIP2Q03169 654 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 CCSAPQ6IQ19 270 aaPredicted RBP19.54■□□□□ 0.72
CD9-209ENST00000540891 RNF180Q86T96 592 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 RMDN3Q96TC7 470 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 MAP3K20Q9NYL2 800 aaKnown RBP19.54■□□□□ 0.72
CD9-209ENST00000540891 PHF24Q9UPV7 400 aa19.54■□□□□ 0.72
CD9-209ENST00000540891 RBM47A0AV96 593 aaKnown RBP19.53■□□□□ 0.72
CD9-209ENST00000540891 H0YGN5 161 aa19.53■□□□□ 0.72
CD9-209ENST00000540891 PDE4DQ08499 809 aa19.53■□□□□ 0.72
CD9-209ENST00000540891 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
CD9-209ENST00000540891 IQSEC1Q6DN90 963 aa19.53■□□□□ 0.72
CD9-209ENST00000540891 SAMD3Q8N6K7 520 aa19.53■□□□□ 0.72
CD9-209ENST00000540891 NSUN6Q8TEA1 469 aaKnown RBP19.53■□□□□ 0.72
CD9-209ENST00000540891 UPF3BQ9BZI7 483 aaKnown RBP19.53■□□□□ 0.72
CD9-209ENST00000540891 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms