RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SPATA31C2B4DYI2 1134 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 EYA2O00167 538 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 PEX10O60683 326 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 IGHA1P01876 353 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 IGHA2P01877 340 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 NBPF7P0C2Y1 421 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-214ENST00000540865 CNGA1P29973 690 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 SCNN1AP37088 669 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 BTDP43251 543 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 EPHB4P54760 987 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 CCNA1P78396 465 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 TLE2Q04725 743 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 PICALMQ13492 652 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 GNASQ5JWF2 1037 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 GJC2Q5T442 439 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-214ENST00000540865 TAS1R3Q7RTX0 852 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 DZIP1Q86YF9 867 aaKnown RBP5.71□□□□□ -1.5
SNHG1-214ENST00000540865 ANKRD44Q8N8A2 993 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 RHBDD1Q8TEB9 315 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 PPM1EQ8WY54 764 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 GINM1Q9NU53 330 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 FLRT1Q9NZU1 646 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 HERC5Q9UII4 1024 aaKnown RBP5.71□□□□□ -1.5
SNHG1-214ENST00000540865 RABGAP1Q9Y3P9 1069 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 TACC3Q9Y6A5 838 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 A0A1B0GUL6 1792 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 GPR75-ASB3A0A0A6YYF3 556 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 ASNSP08243 561 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 CLTBP09497 229 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 CYBAP13498 195 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 CYP2C19P33261 490 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 RHBDL3P58872 404 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 FPGSQ05932 587 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 GRB14Q14449 540 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 RRP1BQ14684 758 aaKnown RBP5.7□□□□□ -1.5
SNHG1-214ENST00000540865 AAK1Q2M2I8 961 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 SPTY2D1Q68D10 685 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-214ENST00000540865 SLC4A10Q6U841 1118 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 TRPV1Q8NER1 839 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 KLHDC4Q8TBB5 520 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 PAGR1Q9BTK6 254 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 LRFN3Q9BTN0 628 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 NIFKQ9BYG3 293 aaKnown RBP5.7□□□□□ -1.5
SNHG1-214ENST00000540865 TIMMDC1Q9NPL8 285 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 CXXC1Q9P0U4 656 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-214ENST00000540865 MROH7-TTC4A0A0A0MT08 1334 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 PDS5AQ29RF7 1337 aaKnown RBP5.7□□□□□ -1.5
SNHG1-214ENST00000540865 CHD7Q9P2D1 2997 aa5.7□□□□□ -1.5
SNHG1-214ENST00000540865 SEPT4O43236 478 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 CNMDO75829 334 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 RAG1P15918 1043 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ITGB8P26012 769 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 WEE1P30291 646 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 NOS2P35228 1153 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 TXLNAP40222 546 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 PHKA1P46020 1223 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ADGRE1Q14246 886 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 LRRC41Q15345 812 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 OCLNQ16625 522 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ATP2B3Q16720 1220 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 SWI5Q1ZZU3 235 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 TMEM31Q5JXX7 168 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 OLFML2BQ68BL8 750 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 CCDC174Q6PII3 467 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 METTL16Q86W50 562 aaKnown RBP5.69□□□□□ -1.5
SNHG1-214ENST00000540865 CCDC155Q8N6L0 562 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 NPLOC4Q8TAT6 608 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 MKNK1Q9BUB5 465 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 PRDM12Q9H4Q4 367 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 GPAMQ9HCL2 828 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 PI4KBQ9UBF8 816 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 ZNF232Q9UNY5 417 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 PHF24Q9UPV7 400 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 IVNS1ABPQ9Y6Y0 642 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 FANCIQ9NVI1 1328 aa5.69□□□□□ -1.5
SNHG1-214ENST00000540865 SLC35F4A4IF30 521 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 STRNO43815 780 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CIAO1O76071 339 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 ARHGEF15O94989 841 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 LDHCP07864 332 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 PSMA6P60900 246 aaKnown RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 GSTO1P78417 241 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 JAG1P78504 1218 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 MECOMQ03112 1051 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 EXOSC9Q06265 439 aaKnown RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 TEAD4Q15561 434 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 RAB30Q15771 203 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CCDC85BQ15834 202 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 RASIP1Q5U651 963 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 WDR78Q5VTH9 848 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CCDC129Q6ZRS4 1044 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CAPN12Q6ZSI9 719 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 ANKRD33Q7Z3H0 272 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms