RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 CCND3P30281 292 aaPredicted RBP10.49□□□□□ -0.73
PXN-209ENST00000540221 CNTN2Q02246 1040 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 ACVR2BQ13705 512 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 LHX8Q68G74 356 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 CPLX2Q6PUV4 134 aaKnown RBP10.49□□□□□ -0.73
PXN-209ENST00000540221 ARMCX2Q7L311 632 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 CCDC144CPQ8IYA2 1237 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
PXN-209ENST00000540221 HTATIP2Q9BUP3 242 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 SPC25Q9HBM1 224 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 VTA1Q9NP79 307 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
PXN-209ENST00000540221 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
PXN-209ENST00000540221 GCOM1H8Y6P7 765 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 SNAI1O95863 264 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 CFBP00751 764 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 POLR2MP0CAP2 368 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 ZNF865P0CJ78 1059 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 RXRAP19793 462 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 ALDH5A1P51649 535 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 HSD17B4P51659 736 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 APOBRQ0VD83 1088 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 IQSEC1Q6DN90 963 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 NECAB2Q7Z6G3 386 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
PXN-209ENST00000540221 CUL5Q93034 780 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 FGD4Q96M96 766 aa10.48□□□□□ -0.73
PXN-209ENST00000540221 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 DNM1LO00429 736 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 PPP1R11O60927 126 aaPredicted RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 DUSP11O75319 330 aaKnown RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 CPA1P15085 419 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 EDNRBP24530 442 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 PDIA3P30101 505 aaKnown RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 PDE4DQ08499 809 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 SLC35G1Q2M3R5 365 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 MCTP2Q6DN12 878 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 UBE2Q1Q7Z7E8 422 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 RNF180Q86T96 592 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 FAM177A1Q8N128 213 aaPredicted RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 CCDC12Q8WUD4 166 aaPredicted RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 RMDN3Q96TC7 470 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 ZHX1Q9UKY1 873 aaPredicted RBP10.47□□□□□ -0.73
PXN-209ENST00000540221 Q9Y3F1 56 aa10.47□□□□□ -0.73
PXN-209ENST00000540221 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 KIAA0100Q14667 2235 aaKnown RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 CENPFP49454 3210 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 CPLX1O14810 134 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 NKRFO15226 690 aaKnown RBP eCLIP10.46□□□□□ -0.73
PXN-209ENST00000540221 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 STAM2O75886 525 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 CDKL5O76039 1030 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 IFNAR1P17181 557 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 FUT2Q10981 343 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 TOB2Q14106 344 aaPredicted RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 STXBP2Q15833 593 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 CCDC144BQ3MJ40 725 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 ARHGEF16Q5VV41 709 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 XRRA1Q6P2D8 792 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 TRIM22Q8IYM9 498 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 CCDC82Q8N4S0 544 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 SMARCC2Q8TAQ2 1214 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 SCFD2Q8WU76 684 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 TSEN34Q9BSV6 310 aaKnown RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 RNF26Q9BY78 433 aaPredicted RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 PSTPIP2Q9H939 334 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 EHMT1Q9H9B1 1298 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 XPNPEP3Q9NQH7 507 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 FAM217BQ9NTX9 383 aaPredicted RBP10.46□□□□□ -0.73
PXN-209ENST00000540221 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 CNTNAP5Q8WYK1 1306 aa10.46□□□□□ -0.73
PXN-209ENST00000540221 ASTN1O14525 1302 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 RBM47A0AV96 593 aaKnown RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 OPLAHO14841 1288 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 PRPF3O43395 683 aaKnown RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 FOSP01100 380 aaPredicted RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 TAL1P17542 331 aaPredicted RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 CDC27P30260 824 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 NKX3-2P78367 333 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 TNFAIP2Q03169 654 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 BRDTQ58F21 947 aaPredicted RBP10.45□□□□□ -0.74
PXN-209ENST00000540221 KCNV1Q6PIU1 500 aa10.45□□□□□ -0.74
PXN-209ENST00000540221 HEATR3Q7Z4Q2 680 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms