RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MAGEF1Q9HAY2 307 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
VTN-202ENST00000539746 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 ITGBL1O95965 494 aaPredicted RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 CFBP00751 764 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 CYP3A4P08684 503 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 ALAS1P13196 640 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 SREBF1P36956 1147 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 HSD17B4P51659 736 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 HERVK_113P62684 666 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 FAM160A1Q05DH4 1040 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 SEMA3FQ13275 785 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 CCL15Q16663 113 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 GNPTABQ3T906 1256 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 TBCKQ8TEA7 893 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 ANO3Q9BYT9 981 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 CUEDC2Q9H467 287 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
VTN-202ENST00000539746 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
VTN-202ENST00000539746 CYP3A7-CYP3A51PA0A087WV96 503 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 STRNO43815 780 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 CYP3A7P24462 503 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 PDIA5Q14554 519 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 PLS1Q14651 629 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 KCTD2Q14681 263 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 CALCRLQ16602 461 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 INF2Q27J81 1249 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
VTN-202ENST00000539746 NLRX1Q86UT6 975 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 CPXCR1Q8N123 301 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 NSUN6Q8TEA1 469 aaKnown RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 ATG4CQ96DT6 458 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 DDX25Q9UHL0 483 aaKnown RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
VTN-202ENST00000539746 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
VTN-202ENST00000539746 TRAF5O00463 557 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 MYL1P05976 194 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 PTPREP23469 700 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 MCM7P33993 719 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 UBA7P41226 1012 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
VTN-202ENST00000539746 NPY5RQ15761 445 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 KCNV1Q6PIU1 500 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 ABRAQ8N0Z2 381 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 ANKRD35Q8N283 1001 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 GIMAP8Q8ND71 665 aaPredicted RBP13.35□□□□□ -0.27
VTN-202ENST00000539746 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 WDR11Q9BZH6 1224 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
VTN-202ENST00000539746 CPVLQ9H3G5 476 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 TLL2Q9Y6L7 1015 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
VTN-202ENST00000539746 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
VTN-202ENST00000539746 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
VTN-202ENST00000539746 PPP1R11O60927 126 aaPredicted RBP13.34□□□□□ -0.27
VTN-202ENST00000539746 BCRP11274 1271 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 CCND2P30279 289 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 MAPK4P31152 587 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 CIITAP33076 1130 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 AMPD3Q01432 767 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 NOGQ13253 232 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 PTGDRQ13258 359 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 NBR1Q14596 966 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 SLC35G1Q2M3R5 365 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 Q4G0T1 1027 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 IQUBQ8NA54 791 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
VTN-202ENST00000539746 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms