RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ARVCFO00192 962 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 PTGS1P23219 599 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 SHHQ15465 462 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 C9orf50Q5SZB4 431 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 KIAA1211Q6ZU35 1233 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 DEFB123Q8N688 67 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 TBX21Q9UL17 535 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 Q9Y3F1 56 aa25.95■■□□□ 1.74
SCARB1-206ENST00000539320 DYNC1LI2O43237 492 aaPredicted RBP25.94■■□□□ 1.74
SCARB1-206ENST00000539320 CDK7P50613 346 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 PTH1RQ03431 593 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 TRDNQ13061 729 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 CXCL17Q6UXB2 119 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 Q7L0L9 218 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 ADGRF4Q8IZF3 695 aa25.94■■□□□ 1.74
SCARB1-206ENST00000539320 MPHOSPH6Q99547 160 aaKnown RBP25.94■■□□□ 1.74
SCARB1-206ENST00000539320 U3KPZ7 1027 aaPredicted RBP25.94■■□□□ 1.74
SCARB1-206ENST00000539320 ABCB11O95342 1321 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 DHX16O60231 1041 aaKnown RBP25.93■■□□□ 1.74
SCARB1-206ENST00000539320 ZEB2O60315 1214 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 CABYRO75952 493 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 CYP21A2P08686 494 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 SEC23AQ15436 765 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 CYB5R4Q7L1T6 521 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 DNERQ8NFT8 737 aa25.93■■□□□ 1.74
SCARB1-206ENST00000539320 SGSM2O43147 1006 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 EDNRBP24530 442 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 FPGSQ05932 587 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 PDE4DQ08499 809 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 QRICH1Q2TAL8 776 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 DUSP28Q4G0W2 176 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 TMEM63BQ5T3F8 832 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 FAM126BQ8IXS8 530 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 RGS22Q8NE09 1264 aa25.92■■□□□ 1.74
SCARB1-206ENST00000539320 MYH6P13533 1939 aa25.91■■□□□ 1.74
SCARB1-206ENST00000539320 RBM47A0AV96 593 aaKnown RBP25.91■■□□□ 1.74
SCARB1-206ENST00000539320 TLR3O15455 904 aaKnown RBP25.91■■□□□ 1.74
SCARB1-206ENST00000539320 WDR11Q9BZH6 1224 aa25.91■■□□□ 1.74
SCARB1-206ENST00000539320 MAF1Q9H063 256 aa25.91■■□□□ 1.74
SCARB1-206ENST00000539320 RALYLQ86SE5 291 aaKnown RBP25.9■■□□□ 1.74
SCARB1-206ENST00000539320 JMJD4Q9H9V9 463 aa25.9■■□□□ 1.74
SCARB1-206ENST00000539320 B4DLN1 442 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 TIMP1P01033 207 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 MRPL12P52815 198 aaKnown RBP25.89■■□□□ 1.74
SCARB1-206ENST00000539320 EPHB4P54760 987 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 FBXO11Q86XK2 927 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 SLC43A3Q8NBI5 491 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 MTMR10Q9NXD2 777 aa25.89■■□□□ 1.74
SCARB1-206ENST00000539320 PPP2R5BQ15173 497 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 FAM109BQ6ICB4 259 aaPredicted RBP25.88■■□□□ 1.73
SCARB1-206ENST00000539320 MCF2L2Q86YR7 1114 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 STAG2Q8N3U4 1231 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 SCFD2Q8WU76 684 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 RNPC3Q96LT9 517 aaKnown RBP25.88■■□□□ 1.73
SCARB1-206ENST00000539320 VAT1LQ9HCJ6 419 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 MRPL11Q9Y3B7 192 aaKnown RBP25.88■■□□□ 1.73
SCARB1-206ENST00000539320 TAF6LQ9Y6J9 622 aa25.88■■□□□ 1.73
SCARB1-206ENST00000539320 IFIT3O14879 490 aaKnown RBP25.87■■□□□ 1.73
SCARB1-206ENST00000539320 ITGA7Q13683 1181 aa25.87■■□□□ 1.73
SCARB1-206ENST00000539320 OR6J1Q8NGC5 347 aa25.87■■□□□ 1.73
SCARB1-206ENST00000539320 NCOA7Q8NI08 942 aa25.87■■□□□ 1.73
SCARB1-206ENST00000539320 SYTL5Q8TDW5 730 aaPredicted RBP25.87■■□□□ 1.73
SCARB1-206ENST00000539320 SEZ6LQ9BYH1 1024 aa25.87■■□□□ 1.73
SCARB1-206ENST00000539320 ERICH2A1L162 156 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 KLRF2D3W0D1 207 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 E7EWF7 191 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 NKRFO15226 690 aaKnown RBP eCLIP25.86■■□□□ 1.735e-7■□□□□ 9.1
SCARB1-206ENST00000539320 CD4P01730 458 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 MFSD5Q6N075 450 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 STOX1Q6ZVD7 989 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 POLR3EQ9NVU0 708 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 MAD2L2Q9UI95 211 aa25.86■■□□□ 1.73
SCARB1-206ENST00000539320 CPT1AP50416 773 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 PPIGQ13427 754 aaKnown RBP eCLIP25.85■■□□□ 1.731e-19■□□□□ 8.1
SCARB1-206ENST00000539320 GRM4Q14833 912 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 SART3Q15020 963 aaKnown RBP25.85■■□□□ 1.73
SCARB1-206ENST00000539320 TBC1D5Q92609 795 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 AMNQ9BXJ7 453 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 PPP1R12CQ9BZL4 782 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 COL20A1Q9P218 1284 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 RBM8AQ9Y5S9 174 aaKnown RBP25.85■■□□□ 1.73
SCARB1-206ENST00000539320 GRIN2DO15399 1336 aa25.85■■□□□ 1.73
SCARB1-206ENST00000539320 PALM3A6NDB9 673 aaPredicted RBP25.84■■□□□ 1.73
SCARB1-206ENST00000539320 PSMC6P62333 389 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 SMAD3P84022 425 aaKnown RBP25.84■■□□□ 1.73
SCARB1-206ENST00000539320 WTAPQ15007 396 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 ZNF697Q5TEC3 545 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 NSUN6Q8TEA1 469 aaKnown RBP25.84■■□□□ 1.73
SCARB1-206ENST00000539320 MAP4K1Q92918 833 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 MTMR8Q96EF0 704 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 STXBP5LQ9Y2K9 1186 aa25.84■■□□□ 1.73
SCARB1-206ENST00000539320 TTLL4Q14679 1199 aa25.83■■□□□ 1.73
SCARB1-206ENST00000539320 BRDTQ58F21 947 aaPredicted RBP25.83■■□□□ 1.73
SCARB1-206ENST00000539320 TAAR1Q96RJ0 339 aa25.83■■□□□ 1.73
SCARB1-206ENST00000539320 SENP2Q9HC62 589 aa25.83■■□□□ 1.73
SCARB1-206ENST00000539320 ZBTB5O15062 677 aa25.82■■□□□ 1.72
SCARB1-206ENST00000539320 MYL3P08590 195 aa25.82■■□□□ 1.72
SCARB1-206ENST00000539320 PURAQ00577 322 aaKnown RBP25.82■■□□□ 1.72
SCARB1-206ENST00000539320 MB21D2Q8IYB1 491 aaPredicted RBP25.82■■□□□ 1.72
SCARB1-206ENST00000539320 TMEM199Q8N511 208 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms