RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KRT40Q6A162 431 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLPB-210ENST00000539148 KRT25Q7Z3Z0 450 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 COA7Q96BR5 231 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
CLPB-210ENST00000539148 VPS54Q9P1Q0 977 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.53
CLPB-210ENST00000539148 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 CFBP00751 764 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 BCRP11274 1271 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 FCGRTP55899 365 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 C17orf99Q6UX52 265 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 HOMER2Q9NSB8 354 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 RNF186Q9NXI6 227 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 BTBD7Q9P203 1132 aa11.7□□□□□ -0.54
CLPB-210ENST00000539148 ADGRA2Q96PE1 1338 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 TRPA1O75762 1119 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 ERCC3P19447 782 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 SNAP25P60880 206 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 SP3Q02447 781 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 GHRHRQ02643 423 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 XRRA1Q6P2D8 792 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 NSMFQ6X4W1 530 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 DIS3L2Q8IYB7 885 aaKnown RBP11.69□□□□□ -0.54
CLPB-210ENST00000539148 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 MMP19Q99542 508 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 CPA4Q9UI42 421 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
CLPB-210ENST00000539148 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 TRAK2O60296 914 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 PPP1R11O60927 126 aaPredicted RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 HSD17B4P51659 736 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 PRMT2P55345 433 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 ORC2Q13416 577 aaPredicted RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 NONOQ15233 471 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLPB-210ENST00000539148 RILPL1Q5EBL4 403 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 NSUN6Q8TEA1 469 aaKnown RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
CLPB-210ENST00000539148 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
CLPB-210ENST00000539148 MYH7BA7E2Y1 1941 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 ASB14A6NK59 587 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 FKTNO75072 461 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 CNMDO75829 334 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 STAM2O75886 525 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 BAG4O95429 457 aaKnown RBP11.67□□□□□ -0.54
CLPB-210ENST00000539148 BMP15O95972 392 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 MBD3O95983 291 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
CLPB-210ENST00000539148 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLPB-210ENST00000539148 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
CLPB-210ENST00000539148 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 DPP9Q86TI2 863 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 NOSTRINQ8IVI9 506 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 CLEC4DQ8WXI8 215 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 ZNF396Q96N95 335 aaPredicted RBP11.67□□□□□ -0.54
CLPB-210ENST00000539148 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 ZIC5Q96T25 663 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 TXNRD2Q9NNW7 524 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 CFAP45Q9UL16 551 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 CEP131Q9UPN4 1083 aa11.67□□□□□ -0.54
CLPB-210ENST00000539148 GPR25O00155 361 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 NFIBO00712 420 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 BRD1O95696 1058 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 TBC1D8O95759 1140 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 GCFC2P16383 781 aaKnown RBP11.66□□□□□ -0.54
CLPB-210ENST00000539148 PTPREP23469 700 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 RGS2P41220 211 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 USP11P51784 963 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 FOSBP53539 338 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
CLPB-210ENST00000539148 GUCY1B3Q02153 619 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
CLPB-210ENST00000539148 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 Q3C1V9 767 aa11.66□□□□□ -0.54
CLPB-210ENST00000539148 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms