RNA–Protein interactions for RNA: ENST00000539116.1

LINC02454-201, Transcript of long intergenic non-protein coding RNA 2454, humanhuman

TSL 4 BASIC

Gene LINC02454, Length 589 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02454-201ENST00000539116 LIG1P18858 919 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 CASP7P55210 303 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 HDLBPQ00341 1268 aaKnown RBP7.78□□□□□ -1.16
LINC02454-201ENST00000539116 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 GPBAR1Q8TDU6 330 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 GAL3ST3Q96A11 431 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 CWC22Q9HCG8 908 aaKnown RBP7.78□□□□□ -1.16
LINC02454-201ENST00000539116 MYH3P11055 1940 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 SPEF2Q9C093 1822 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 SPATA31A1Q5TZJ5 1347 aa7.78□□□□□ -1.16
LINC02454-201ENST00000539116 ZNF831Q5JPB2 1677 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 SGSM2O43147 1006 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
LINC02454-201ENST00000539116 ZNF862O60290 1169 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 SASH1O94885 1247 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 PROCP04070 461 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 A1BGP04217 495 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 SLFN14P0C7P3 912 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
LINC02454-201ENST00000539116 DDIT3P35638 169 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 GATA4P43694 442 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 NUCB2P80303 420 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 LMNB2Q03252 620 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 TCIRG1Q13488 830 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 TSHZ3Q63HK5 1081 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 USP48Q86UV5 1035 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 METTL16Q86W50 562 aaKnown RBP7.77□□□□□ -1.17
LINC02454-201ENST00000539116 TRIM42Q8IWZ5 723 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 PIGBQ92521 554 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 ISCA1Q9BUE6 129 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 GPR108Q9NPR9 543 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
LINC02454-201ENST00000539116 SLIT2O94813 1529 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 MAP3K15Q6ZN16 1313 aa7.77□□□□□ -1.17
LINC02454-201ENST00000539116 MINDY4BA8MYZ0 360 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 CIAO1O76071 339 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 TIAF1O95411 115 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 PCCAP05165 728 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 ADH5P11766 374 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 IL15P40933 162 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 RFX5P48382 616 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 CAMK2GQ13555 558 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 DDB1Q16531 1140 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 CCDC84Q86UT8 332 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 KRTAP1-3Q8IUG1 177 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 WDR89Q96FK6 387 aaPredicted RBP7.76□□□□□ -1.17
LINC02454-201ENST00000539116 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 PLA2G12BQ9BX93 195 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 AP4E1Q9UPM8 1137 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 PCDHB5Q9Y5E4 795 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 RREB1Q92766 1687 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 CDHR2Q9BYE9 1310 aa7.76□□□□□ -1.17
LINC02454-201ENST00000539116 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 ERVV-1B6SEH8 477 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 GOLGA6L22H0YM25 854 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 FRAT2O75474 233 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 PF4P02776 101 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 ITGB2P05107 769 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 HSP90B1P14625 803 aaKnown RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 ATP5JP18859 108 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 HSPA4P34932 840 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 DEKP35659 375 aaKnown RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 IL6STP40189 918 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 PREPP48147 710 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 FOXO4P98177 505 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 ID3Q02535 119 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 SOX4Q06945 474 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 SEPT6Q14141 434 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 RAB3GAP1Q15042 981 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 LRRFIP1Q32MZ4 808 aaKnown RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 TNNI3KQ59H18 835 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 EPHA10Q5JZY3 1008 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 LMBR1LQ6UX01 489 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 NT5DC4Q86YG4 428 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 UNC5CLQ8IV45 518 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 DNAJC10Q8IXB1 793 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 SMARCC1Q92922 1105 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 EAF2Q96CJ1 260 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
LINC02454-201ENST00000539116 SIL1Q9H173 461 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 ASAP1Q9ULH1 1129 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 PCDHA4Q9UN74 947 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 PCDHGC5Q9Y5F6 944 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 FPGT-TNNI3KV9GXZ4 949 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 NUP98P52948 1817 aa7.75□□□□□ -1.17
LINC02454-201ENST00000539116 JCADQ9P266 1359 aa7.74□□□□□ -1.17
LINC02454-201ENST00000539116 TMPRSS2O15393 492 aa7.74□□□□□ -1.17
LINC02454-201ENST00000539116 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
LINC02454-201ENST00000539116 CYP19A1P11511 503 aaPredicted RBP7.74□□□□□ -1.17
LINC02454-201ENST00000539116 MCM4P33991 863 aa7.74□□□□□ -1.17
LINC02454-201ENST00000539116 EIF4A3P38919 411 aaKnown RBP7.74□□□□□ -1.17
LINC02454-201ENST00000539116 CCDC57Q2TAC2 916 aa7.74□□□□□ -1.17
LINC02454-201ENST00000539116 ZNF394Q53GI3 561 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms