RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 GSTO1P78417 241 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 KCNB1Q14721 858 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 LZTFL1Q9NQ48 299 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 MAD2L2Q9UI95 211 aa16.34■□□□□ 0.21
CDCA3-207ENST00000538862 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.21
CDCA3-207ENST00000538862 RPS12P25398 132 aaKnown RBP16.33■□□□□ 0.21
CDCA3-207ENST00000538862 PRCPP42785 496 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 USP5P45974 858 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 PPP4CP60510 307 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 TEX35Q5T0J7 233 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 CEP112Q8N8E3 955 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.21
CDCA3-207ENST00000538862 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 CCSER1Q9C0I3 900 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 VPS16Q9H269 839 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 CD209Q9NNX6 404 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 CDC23Q9UJX2 597 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 PCDHA6Q9UN73 950 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 JAG2Q9Y219 1238 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 PCDHA8Q9Y5H6 950 aa16.33■□□□□ 0.21
CDCA3-207ENST00000538862 BAG3O95817 575 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 PRPHP41219 470 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 GTF2IP78347 998 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 DACT2Q5SW24 774 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
CDCA3-207ENST00000538862 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
CDCA3-207ENST00000538862 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 ADSSL1Q8N142 457 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
CDCA3-207ENST00000538862 MKNK2Q9HBH9 465 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
CDCA3-207ENST00000538862 PASKQ96RG2 1323 aa16.32■□□□□ 0.2
CDCA3-207ENST00000538862 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
CDCA3-207ENST00000538862 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-207ENST00000538862 PARD6BQ9BYG5 372 aa16.32■□□□□ 0.2
CDCA3-207ENST00000538862 ARFGAP3Q9NP61 516 aa16.32■□□□□ 0.2
CDCA3-207ENST00000538862 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
CDCA3-207ENST00000538862 TRAF5O00463 557 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 LDHCP07864 332 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 TSPY3P0CV98 308 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 TSPY8P0CW00 308 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 EEF1GP26641 437 aaKnown RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF569Q5MCW4 686 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 C15orf52Q6ZUT6 534 aaKnown RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF804AQ7Z570 1209 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 AGBL3Q8NEM8 1001 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 GMLQ99445 158 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 MAGEF1Q9HAY2 307 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 PALM3A6NDB9 673 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 RHOBTB3O94955 611 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 UBA7P41226 1012 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ERVK-24P63145 666 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 UBXN1Q04323 297 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 STIM1Q13586 685 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 BRD3Q15059 726 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 STRIP1Q5VSL9 837 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
CDCA3-207ENST00000538862 DYNLL2Q96FJ2 89 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 THAP9Q9H5L6 903 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
CDCA3-207ENST00000538862 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-207ENST00000538862 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 STXBP3O00186 592 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 COBLO75128 1261 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 TBC1D8O95759 1140 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
CDCA3-207ENST00000538862 CDC25AP30304 524 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 KRT9P35527 623 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 AK8Q96MA6 479 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-207ENST00000538862 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
CDCA3-207ENST00000538862 CYTH3O43739 400 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 KLRC4O43908 158 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 SEC31AO94979 1220 aaKnown RBP16.29■□□□□ 0.2
CDCA3-207ENST00000538862 DNAJC5GQ8N7S2 189 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 GIMAP8Q8ND71 665 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-207ENST00000538862 SPZ1Q9BXG8 430 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms