RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 C9orf50Q5SZB4 431 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 SLC30A10Q6XR72 485 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 RNF207Q6ZRF8 634 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 Q7L0L9 218 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 Q9Y3F1 56 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 GBF1Q92538 1859 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 TRIP12Q14669 1992 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-209ENST00000538753 SCN10AQ9Y5Y9 1956 aa16.96■□□□□ 0.31
COPS7A-209ENST00000538753 ARVCFO00192 962 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 DYNC1LI2O43237 492 aaPredicted RBP16.95■□□□□ 0.3
COPS7A-209ENST00000538753 CHMLP26374 656 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 CALML3P27482 149 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
COPS7A-209ENST00000538753 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 UBAC1Q9BSL1 405 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
COPS7A-209ENST00000538753 CABYRO75952 493 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 PARP1P09874 1014 aaKnown RBP16.94■□□□□ 0.3
COPS7A-209ENST00000538753 PTGS1P23219 599 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 USH1GQ495M9 461 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
COPS7A-209ENST00000538753 FAM109BQ6ICB4 259 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-209ENST00000538753 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 RGS22Q8NE09 1264 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 MTMR10Q9NXD2 777 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
COPS7A-209ENST00000538753 RBM47A0AV96 593 aaKnown RBP16.93■□□□□ 0.3
COPS7A-209ENST00000538753 ZEB2O60315 1214 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 TIMP1P01033 207 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 PTH1RQ03431 593 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 FPGSQ05932 587 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-209ENST00000538753 CXCL17Q6UXB2 119 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 FAM126BQ8IXS8 530 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
COPS7A-209ENST00000538753 WDR11Q9BZH6 1224 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 MAF1Q9H063 256 aa16.93■□□□□ 0.3
COPS7A-209ENST00000538753 EDNRBP24530 442 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 EPHB4P54760 987 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 PDE4DQ08499 809 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 TRDNQ13061 729 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 SEC23AQ15436 765 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 CYB5R4Q7L1T6 521 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 SLC43A3Q8NBI5 491 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
COPS7A-209ENST00000538753 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 ABCB11O95342 1321 aa16.92■□□□□ 0.3
COPS7A-209ENST00000538753 B4DLN1 442 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 TLR3O15455 904 aaKnown RBP16.91■□□□□ 0.3
COPS7A-209ENST00000538753 CD4P01730 458 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 CYP21A2P08686 494 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
COPS7A-209ENST00000538753 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 SEZ6LQ9BYH1 1024 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 GRIN2DO15399 1336 aa16.91■□□□□ 0.3
COPS7A-209ENST00000538753 SGSM2O43147 1006 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
COPS7A-209ENST00000538753 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
COPS7A-209ENST00000538753 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
COPS7A-209ENST00000538753 VAT1LQ9HCJ6 419 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 STXBP5LQ9Y2K9 1186 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 TRANK1O15050 2925 aa16.9■□□□□ 0.3
COPS7A-209ENST00000538753 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.3
COPS7A-209ENST00000538753 DOCK5Q9H7D0 1870 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 CPT1AP50416 773 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
COPS7A-209ENST00000538753 MRPL11Q9Y3B7 192 aaKnown RBP16.89■□□□□ 0.29
COPS7A-209ENST00000538753 E7EWF7 191 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 NKRFO15226 690 aaKnown RBP eCLIP16.88■□□□□ 0.29
COPS7A-209ENST00000538753 PSMC6P62333 389 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 PPIGQ13427 754 aaKnown RBP eCLIP16.88■□□□□ 0.29
COPS7A-209ENST00000538753 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 ZNF697Q5TEC3 545 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 TMEM199Q8N511 208 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 SYTL5Q8TDW5 730 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-209ENST00000538753 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
COPS7A-209ENST00000538753 CUL9Q8IWT3 2517 aa16.87■□□□□ 0.29
COPS7A-209ENST00000538753 PALM3A6NDB9 673 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-209ENST00000538753 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms