RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DBNDD1Q9H9R9 158 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 JMJD4Q9H9V9 463 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 VAT1LQ9HCJ6 419 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
USP28-206ENST00000538224 LRWD1Q9UFC0 647 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 HERC5Q9UII4 1024 aaKnown RBP7.44□□□□□ -1.22
USP28-206ENST00000538224 HDAC9Q9UKV0 1011 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 PPP2R2CQ9Y2T4 447 aa7.44□□□□□ -1.22
USP28-206ENST00000538224 LGALS16A8MUM7 142 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 ADAMTS3O15072 1205 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 KLRC4O43908 158 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 MARCH6O60337 910 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 KIF20AO95235 890 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 FOSP01100 380 aaPredicted RBP7.43□□□□□ -1.22
USP28-206ENST00000538224 CCNE1P24864 410 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 CASP1P29466 404 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TECP42680 631 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 PRCPP42785 496 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 SLC1A4P43007 532 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TNNI2P48788 182 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 MMP14P50281 582 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 DNM2P50570 870 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 USP11P51784 963 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 STX17P56962 302 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 PDE4DQ08499 809 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 PSMD2Q13200 908 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TUBB2AQ13885 445 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
USP28-206ENST00000538224 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 CCDC93Q567U6 631 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 SLFN13Q68D06 897 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TATDN1Q6P1N9 297 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 KIAA0825Q8IV33 1275 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
USP28-206ENST00000538224 SLFN12Q8IYM2 578 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
USP28-206ENST00000538224 RTKN2Q8IZC4 609 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 LARP4BQ92615 738 aaKnown RBP7.43□□□□□ -1.22
USP28-206ENST00000538224 STAMQ92783 540 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 MED15Q96RN5 788 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 MTRQ99707 1265 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 TUBB2BQ9BVA1 445 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 NUP58Q9BVL2 599 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 SH2D4AQ9H788 454 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 PSTPIP2Q9H939 334 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 DNAI1Q9UI46 699 aa7.43□□□□□ -1.22
USP28-206ENST00000538224 PP2D1A8MPX8 630 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 TBX3O15119 743 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 PPIP5K2O43314 1243 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 EEF2P13639 858 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 CCT6AP40227 531 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 TXKP42681 527 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 EIF6P56537 245 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 TUBB4BP68371 445 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 RBM10P98175 930 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 LRRC63Q05C16 580 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 NCBP1Q09161 790 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 NFIAQ12857 509 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 SLC15A2Q16348 729 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 CDC37Q16543 378 aaPredicted RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 ABCB5Q2M3G0 1257 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 TMEM119Q4V9L6 283 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 HYIQ5T013 277 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 RBM26Q5T8P6 1007 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 HAUS3Q68CZ6 603 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 MSL1Q68DK7 614 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 CYP26C1Q6V0L0 522 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 SYT10Q6XYQ8 523 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 RASGRP2Q7LDG7 609 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 REXO1L1PQ8IX06 675 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 CSGALNACT2Q8N6G5 542 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 P2RX5Q93086 422 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 COA7Q96BR5 231 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 PSMD1Q99460 953 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 TSG101Q99816 390 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 AMNQ9BXJ7 453 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 CPVLQ9H3G5 476 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 ARHGEF10LQ9HCE6 1279 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 BMP2KQ9NSY1 1161 aaPredicted RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 TMEM260Q9NX78 707 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 MYO1AQ9UBC5 1043 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 DDX25Q9UHL0 483 aaKnown RBP7.42□□□□□ -1.22
USP28-206ENST00000538224 GDAQ9Y2T3 454 aa7.42□□□□□ -1.22
USP28-206ENST00000538224 BRCA1P38398 1863 aaKnown RBP7.41□□□□□ -1.22
USP28-206ENST00000538224 CYP3A7-CYP3A51PA0A087WV96 503 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 TEX33O43247 280 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 KIF5CO60282 957 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 GYPCP04921 128 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 CYP3A7P24462 503 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 CDC25AP30304 524 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 CASQ1P31415 396 aa7.41□□□□□ -1.22
USP28-206ENST00000538224 ADKP55263 362 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms