RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 VSTM4Q8IW00 320 aa19.67■□□□□ 0.74
SNX17-210ENST00000537606 MMTAG2Q9BU76 263 aaKnown RBP19.67■□□□□ 0.74
SNX17-210ENST00000537606 POTEMA6NI47 508 aa19.67■□□□□ 0.74
SNX17-210ENST00000537606 KIAA1755Q5JYT7 1200 aa19.67■□□□□ 0.74
SNX17-210ENST00000537606 SPATA1Q5VX52 437 aa19.67■□□□□ 0.74
SNX17-210ENST00000537606 E4F1Q66K89 784 aaPredicted RBP19.67■□□□□ 0.74
SNX17-210ENST00000537606 AK8Q96MA6 479 aa19.67■□□□□ 0.74
SNX17-210ENST00000537606 GMCL1P1Q8NEA9 526 aa19.66■□□□□ 0.74
SNX17-210ENST00000537606 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
SNX17-210ENST00000537606 BMP3P12645 472 aa19.66■□□□□ 0.74
SNX17-210ENST00000537606 GTF2F1P35269 517 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNX17-210ENST00000537606 ZYXQ15942 572 aaKnown RBP19.66■□□□□ 0.74
SNX17-210ENST00000537606 DALRD3Q5D0E6 543 aaKnown RBP19.66■□□□□ 0.74
SNX17-210ENST00000537606 IGSF22Q8N9C0 903 aa19.66■□□□□ 0.74
SNX17-210ENST00000537606 KBTBD4Q9NVX7 518 aa19.66■□□□□ 0.74
SNX17-210ENST00000537606 LRWD1Q9UFC0 647 aa19.66■□□□□ 0.74
SNX17-210ENST00000537606 KMT5BQ4FZB7 885 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 ZNF658Q5TYW1 1059 aaPredicted RBP19.65■□□□□ 0.74
SNX17-210ENST00000537606 CEP135Q66GS9 1140 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 CREBRFQ8IUR6 639 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 DDX25Q9UHL0 483 aaKnown RBP19.65■□□□□ 0.74
SNX17-210ENST00000537606 MYO1BO43795 1136 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 PRCPP42785 496 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 SAMD1Q6SPF0 538 aaPredicted RBP19.65■□□□□ 0.74
SNX17-210ENST00000537606 CCDC84Q86UT8 332 aaPredicted RBP19.65■□□□□ 0.74
SNX17-210ENST00000537606 GMCL1Q96IK5 515 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 NUDT12Q9BQG2 462 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 PSME4Q14997 1843 aa19.65■□□□□ 0.74
SNX17-210ENST00000537606 WNT10BO00744 389 aa19.64■□□□□ 0.74
SNX17-210ENST00000537606 PTPN14Q15678 1187 aa19.64■□□□□ 0.74
SNX17-210ENST00000537606 SYDE2Q5VT97 1194 aa19.64■□□□□ 0.74
SNX17-210ENST00000537606 NYAP1Q6ZVC0 841 aa19.64■□□□□ 0.74
SNX17-210ENST00000537606 P2RX7Q99572 595 aaKnown RBP19.64■□□□□ 0.74
SNX17-210ENST00000537606 KLRC4O43908 158 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 EGFRP00533 1210 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 TGFB2P61812 414 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 ZNF710Q8N1W2 664 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 AGBL3Q8NEM8 1001 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 FBXO41Q8TF61 875 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 NELFBQ8WX92 580 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 TAOK3Q9H2K8 898 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 RMND1Q9NWS8 449 aa19.64■□□□□ 0.73
SNX17-210ENST00000537606 TEX33O43247 280 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 MARCH6O60337 910 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 HAS1Q92839 578 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 MYH7BA7E2Y1 1941 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 SRCAPQ6ZRS2 3230 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 TRIM49BA6NDI0 452 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 MEIS2O14770 477 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 FBXO11Q86XK2 927 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 ARID3AQ99856 593 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 ZBTB21Q9ULJ3 1066 aa19.63■□□□□ 0.73
SNX17-210ENST00000537606 POLD1P28340 1107 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 PAK1Q13153 545 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 GRB10Q13322 594 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 ORC2Q13416 577 aaPredicted RBP19.62■□□□□ 0.73
SNX17-210ENST00000537606 TMEM266Q2M3C6 531 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
SNX17-210ENST00000537606 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 PPP4R3AQ6IN85 833 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 APTXQ7Z2E3 356 aaKnown RBP19.62■□□□□ 0.73
SNX17-210ENST00000537606 RRP9O43818 475 aaKnown RBP19.62■□□□□ 0.73
SNX17-210ENST00000537606 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNX17-210ENST00000537606 NR1I3Q14994 352 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 PPP1R13BQ96KQ4 1090 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 PNMA5Q96PV4 448 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 ANO3Q9BYT9 981 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 GLIS2Q9BZE0 524 aaPredicted RBP19.62■□□□□ 0.73
SNX17-210ENST00000537606 TRIM9Q9C026 710 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 ARHGEF10LQ9HCE6 1279 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 PRR12Q9ULL5 1215 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
SNX17-210ENST00000537606 NFKBIEO00221 500 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 HOXA13P31271 388 aaPredicted RBP19.61■□□□□ 0.73
SNX17-210ENST00000537606 PMS1P54277 932 aaKnown RBP19.61■□□□□ 0.73
SNX17-210ENST00000537606 CDKAL1Q5VV42 579 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 HPS3Q969F9 1004 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 VPS33BQ9H267 617 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 SMCHD1A6NHR9 2005 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
SNX17-210ENST00000537606 CCT6AP40227 531 aaKnown RBP19.61■□□□□ 0.73
SNX17-210ENST00000537606 ASIC1P78348 528 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 MCM6Q14566 821 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
SNX17-210ENST00000537606 A0A1B0GTH6 734 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 ADKP55263 362 aaKnown RBP19.6■□□□□ 0.73
SNX17-210ENST00000537606 R3HDM1Q15032 1099 aaKnown RBP19.6■□□□□ 0.73
SNX17-210ENST00000537606 ECM1Q16610 540 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 EEF2KMTQ96G04 330 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 CDK5RAP3Q96JB5 506 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 BLOC1S4Q9NUP1 217 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 TMX2Q9Y320 296 aa19.6■□□□□ 0.73
SNX17-210ENST00000537606 NAA30Q147X3 362 aaPredicted RBP19.6■□□□□ 0.73
SNX17-210ENST00000537606 SPECC1LQ69YQ0 1117 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms