RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TBC1D5Q92609 795 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 GNEQ9Y223 722 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ABCB11O95342 1321 aa20.8■□□□□ 0.92
TNFRSF1A-209ENST00000536717 LOC102724159A0A0B4J2E5 919 aa20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 C6orf222P0C671 652 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MAGEA10P43363 369 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PWP2Q15269 919 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 LY9Q9HBG7 655 aa20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CTAGE5O15320 804 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ACLYP53396 1101 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 NKX3-2P78367 333 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 KCNA10Q16322 511 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TRIM60Q495X7 471 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MTA3Q9BTC8 594 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 VTA1Q9NP79 307 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MOXD2PA6NHM9 499 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PRC1O43663 620 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CYTH3O43739 400 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 EIF5BO60841 1220 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PPP1R11O60927 126 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 REC8O95072 547 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SMPD1P17405 629 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 PTGS1P23219 599 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 BMP8BP34820 402 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 DNERQ8NFT8 737 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 RIOX1Q9H6W3 641 aa20.78■□□□□ 0.92
TNFRSF1A-209ENST00000536717 ZBTB5O15062 677 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 EDNRBP24530 442 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MCM5P33992 734 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MAF1Q9H063 256 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 SPC25Q9HBM1 224 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 COL20A1Q9P218 1284 aa20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 MRPL11Q9Y3B7 192 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1A-209ENST00000536717 LAMA2P24043 3122 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 A0A1W2PPC1 479 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 OPLAHO14841 1288 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 ASGR1P07306 291 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 IQSEC1Q6DN90 963 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 NOL8Q76FK4 1167 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TLK2Q86UE8 772 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PCSK9Q8NBP7 692 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 SYTL5Q8TDW5 730 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 AMNQ9BXJ7 453 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 STARD7Q9NQZ5 370 aa20.76■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MYH7BA7E2Y1 1941 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MDM2Q00987 491 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 GNASQ5JWF2 1037 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 NUP133Q8WUM0 1156 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PIGSQ96S52 555 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MYL10Q9BUA6 226 aa20.75■□□□□ 0.91
TNFRSF1A-209ENST00000536717 RBM47A0AV96 593 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 BEX3Q00994 111 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TLE2Q04725 743 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MCF2L2Q86YR7 1114 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TAAR1Q96RJ0 339 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PDLIM7Q9NR12 457 aa20.74■□□□□ 0.91
TNFRSF1A-209ENST00000536717 DYNC1LI2O43237 492 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 DDAH1O94760 285 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PDE4DQ08499 809 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 DUSP28Q4G0W2 176 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 RNF20Q5VTR2 975 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 SH3RF1Q7Z6J0 888 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 GLT1D1Q96MS3 346 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 LRRC2Q9BYS8 371 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 Q9Y3F1 56 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PCDHA1Q9Y5I3 950 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 LIFRP42702 1097 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 GHRHRQ02643 423 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 C8orf34Q49A92 452 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TMTC2Q8N394 836 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 MPHOSPH6Q99547 160 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 WDR11Q9BZH6 1224 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
TNFRSF1A-209ENST00000536717 ELP1O95163 1332 aa20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 CFBP00751 764 aa20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 HSD17B4P51659 736 aa20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 FSCN1Q16658 493 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TSGA10IPQ3SY00 556 aa20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PRDM5Q9NQX1 630 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1A-209ENST00000536717 SCN10AQ9Y5Y9 1956 aa20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 PQBP1O60828 265 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 ADCK5Q3MIX3 580 aa20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 NFXL1Q6ZNB6 911 aa20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 ANKRD33Q7Z3H0 272 aa20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1A-209ENST00000536717 NSUN6Q8TEA1 469 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms