RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CHST3Q7LGC8 479 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FMR1NBQ8N0W7 255 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 AIDAQ96BJ3 306 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ERLEC1Q96DZ1 483 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CYFIP2Q96F07 1278 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ALS2CR12Q96Q35 445 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ZBED2Q9BTP6 218 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 MMTAG2Q9BU76 263 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 EPN3Q9H201 632 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FAM153AQ9UHL3 310 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 LEMD3Q9Y2U8 911 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SALL3Q9BXA9 1300 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 A0A0G2JS52 829 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FAM170AA1A519 330 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ERICH2A1L162 156 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 EPB41L2O43491 1005 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 SUPT3HO75486 399 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SASH1O94885 1247 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SLC3A2P08195 630 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 PARP1P09874 1014 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 CCDC175P0C221 793 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 STX17P56962 302 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 DEUP1Q05D60 604 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ADAM9Q13443 819 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FILIP1LQ4L180 1135 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 TOM1L2Q6ZVM7 507 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 GRAMD1CQ8IYS0 662 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CNBD1Q8NA66 436 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 WNT2BQ93097 391 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 HVCN1Q96D96 273 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SRPK1Q96SB4 655 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 LRRC1Q9BTT6 524 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 PRR14Q9BWN1 585 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SLC5A4Q9NY91 659 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ZFATQ9P243 1243 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CORO1CQ9ULV4 474 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 NDUFB9Q9Y6M9 179 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SCN4AP35499 1836 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 KAT6BQ8WYB5 2073 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ADAMTSL1Q8N6G6 1762 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 NPHP3-ACAD11A0A0J9YXS1 232 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 MGRN1O60291 552 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ATP5JP18859 108 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 ROR2Q01974 943 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 FMR1Q06787 632 aaKnown RBP eCLIP4.14□□□□□ -1.75
MCF2-210ENST00000536274 PDIA6Q15084 440 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 P3H1Q32P28 736 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FOXB2Q5VYV0 432 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 C6orf89Q6UWU4 347 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CCNI2Q6ZMN8 369 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 TSHZ1Q6ZSZ6 1077 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 KSR1Q8IVT5 923 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 MFN1Q8IWA4 741 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 RBM12BQ8IXT5 1001 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 RPAP2Q8IXW5 612 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 CCDC170Q8IYT3 715 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CAGE1Q8TC20 777 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 NOC3LQ8WTT2 800 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 HOOK2Q96ED9 719 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 RPS6KC1Q96S38 1066 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 NAPGQ99747 312 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 LZTS2Q9BRK4 669 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 OSBPL3Q9H4L5 887 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 EBF2Q9HAK2 575 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 AGAP1Q9UPQ3 857 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 RBM8AQ9Y5S9 174 aaKnown RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 DUSP10Q9Y6W6 482 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 PCDH11XQ9BZA7 1347 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 PCDH11YQ9BZA8 1340 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 MEGF6O75095 1541 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 A6NHS1 94 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 DCDC2CA8MYV0 355 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 MAGEB3O15480 346 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 BMP6P22004 513 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 SLC8A1P32418 973 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 CCNFP41002 786 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 KCNJ6P48051 423 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 GNAQP50148 359 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 NLRP12P59046 1061 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 ZC3H6P61129 1189 aaKnown RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 TGFB2P61812 414 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 CUL3Q13618 768 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 BLMHQ13867 455 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 RASA3Q14644 834 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 TAF11Q15544 211 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 Q4G0T1 1027 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 ZC2HC1CQ53FD0 456 aaPredicted RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 ANO7Q6IWH7 933 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 MDM1Q8TC05 714 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 SMCR8Q8TEV9 937 aaPredicted RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 UCMAQ8WVF2 138 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 CCDC43Q96MW1 224 aaKnown RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 ARPC5LQ9BPX5 153 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 API5Q9BZZ5 524 aaKnown RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 STRN4Q9NRL3 753 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 HOMER3Q9NSC5 361 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 SIPA1L3O60292 1781 aaPredicted RBP4.13□□□□□ -1.75
MCF2-210ENST00000536274 A0A0G2JLW4 131 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 DYTNA2CJ06 578 aa4.13□□□□□ -1.75
MCF2-210ENST00000536274 ZNF233A6NK53 670 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms