RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 DNAJC25Q9H1X3 360 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 SEC63Q9UGP8 760 aaKnown RBP9.07□□□□□ -0.96
COL21A1-212ENST00000535941 MYH11P35749 1972 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 SLC37A4O43826 429 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 BMP3P12645 472 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 LMNB1P20700 586 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 SREBF1P36956 1147 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 PNOCQ13519 176 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 ZNF174Q15697 407 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 INF2Q27J81 1249 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 SAMD3Q8N6K7 520 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 CUEDC2Q9H467 287 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 DISC1Q9NRI5 854 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 TMEM260Q9NX78 707 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 HACL1Q9UJ83 578 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 PRR12Q9ULL5 1215 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 GCFC2P16383 781 aaKnown RBP9.07□□□□□ -0.96
COL21A1-212ENST00000535941 HSD17B4P51659 736 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 RBM5P52756 815 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL21A1-212ENST00000535941 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
COL21A1-212ENST00000535941 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 FOXR2Q6PJQ5 311 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 LUZP1Q86V48 1076 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 TBCKQ8TEA7 893 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 JDP2Q8WYK2 163 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 COA7Q96BR5 231 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 KCND1Q9NSA2 647 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 TMOD2Q9NZR1 351 aa9.07□□□□□ -0.96
COL21A1-212ENST00000535941 ZNFX1Q9P2E3 1918 aaKnown RBP9.07□□□□□ -0.96
COL21A1-212ENST00000535941 RASA3Q14644 834 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 KIF4BQ2VIQ3 1234 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 CUL5Q93034 780 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 CNOT7Q9UIV1 285 aaKnown RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 TBX3O15119 743 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 POLR2DO15514 142 aaKnown RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 OR52Z1P0C646 297 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 KCNB1Q14721 858 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 FAM160B2Q86V87 743 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 APOBEC3FQ8IUX4 373 aaKnown RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 LPAR1Q92633 364 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 GSDMAQ96QA5 445 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 NAP1L4Q99733 375 aaKnown RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 GLIS2Q9BZE0 524 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ARHGEF10LQ9HCE6 1279 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 GPCPD1Q9NPB8 672 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ZKSCAN5Q9Y2L8 839 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 SOCS7O14512 581 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ASNSP08243 561 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 HOXA7P31268 230 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 SLC1A4P43007 532 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 TNNI2P48788 182 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ZNF165P49910 485 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ZNF75DP51815 510 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 GNL2Q13823 731 aaKnown RBP9.06□□□□□ -0.96
COL21A1-212ENST00000535941 ECM1Q16610 540 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 POTEDQ86YR6 584 aa9.06□□□□□ -0.96
COL21A1-212ENST00000535941 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 ATP2A1O14983 1001 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 WDR46O15213 610 aaKnown RBP9.05□□□□□ -0.96
COL21A1-212ENST00000535941 SLC16A2P36021 539 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 CCDC194A0A1B0GVG4 234 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 ADCY5O95622 1261 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 MCM7P33993 719 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 C7orf25Q9BPX7 421 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 AMNQ9BXJ7 453 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
COL21A1-212ENST00000535941 MAP3K20Q9NYL2 800 aaKnown RBP9.05□□□□□ -0.96
COL21A1-212ENST00000535941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 NEMFO60524 1076 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 STAT2P52630 851 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 GRB10Q13322 594 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 SPECC1Q5M775 1068 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 CDKAL1Q5VV42 579 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 TSC1Q92574 1164 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 BLOC1S4Q9NUP1 217 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 BCS1LQ9Y276 419 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 ABCB11O95342 1321 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 FRMD3A2A2Y4 597 aa9.04□□□□□ -0.96
COL21A1-212ENST00000535941 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
COL21A1-212ENST00000535941 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms