RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CMTR1Q8N1G2 835 aaKnown RBP25.73■■□□□ 1.71
VPS37C-202ENST00000535818 MPHOSPH6Q99547 160 aaKnown RBP25.73■■□□□ 1.71
VPS37C-202ENST00000535818 CYP46A1Q9Y6A2 500 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 MCM3APO60318 1980 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 ASTN1O14525 1302 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 RARBP10826 455 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 APOBRQ0VD83 1088 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 TMTC3Q6ZXV5 915 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 RUFY3Q7L099 469 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 SRBD1Q8N5C6 995 aaKnown RBP25.72■■□□□ 1.71
VPS37C-202ENST00000535818 DIS3LQ8TF46 1054 aaKnown RBP25.72■■□□□ 1.71
VPS37C-202ENST00000535818 PAWRQ96IZ0 340 aaKnown RBP25.72■■□□□ 1.71
VPS37C-202ENST00000535818 MAF1Q9H063 256 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 FAM184BQ9ULE4 1060 aa25.72■■□□□ 1.71
VPS37C-202ENST00000535818 BAZ2BQ9UIF8 2168 aaKnown RBP25.72■■□□□ 1.71
VPS37C-202ENST00000535818 CFBP00751 764 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 NECAB2Q7Z6G3 386 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 UBE2Q1Q7Z7E8 422 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 CCDC82Q8N4S0 544 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 TM6SF1Q9BZW5 370 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 ZSWIM6Q9HCJ5 1215 aa25.71■■□□□ 1.71
VPS37C-202ENST00000535818 MYCNP04198 464 aaPredicted RBP25.7■■□□□ 1.7
VPS37C-202ENST00000535818 DNERQ8NFT8 737 aa25.7■■□□□ 1.7
VPS37C-202ENST00000535818 TBC1D5Q92609 795 aa25.7■■□□□ 1.7
VPS37C-202ENST00000535818 DDX49Q9Y6V7 483 aaKnown RBP25.7■■□□□ 1.7
VPS37C-202ENST00000535818 LOC102724159A0A0B4J2E5 919 aa25.69■■□□□ 1.7
VPS37C-202ENST00000535818 METAP2P50579 478 aaKnown RBP eCLIP25.69■■□□□ 1.7
VPS37C-202ENST00000535818 RCAN1P53805 252 aa25.69■■□□□ 1.7
VPS37C-202ENST00000535818 PWP2Q15269 919 aaKnown RBP25.69■■□□□ 1.7
VPS37C-202ENST00000535818 SYTL5Q8TDW5 730 aaPredicted RBP25.69■■□□□ 1.7
VPS37C-202ENST00000535818 HTATIP2Q9BUP3 242 aa25.69■■□□□ 1.7
VPS37C-202ENST00000535818 UPF3BQ9BZI7 483 aaKnown RBP25.69■■□□□ 1.7
VPS37C-202ENST00000535818 XPNPEP3Q9NQH7 507 aa25.69■■□□□ 1.7
VPS37C-202ENST00000535818 B4DLN1 442 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 MRPL12P52815 198 aaKnown RBP25.68■■□□□ 1.7
VPS37C-202ENST00000535818 PDE4DQ08499 809 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 CCDC144BQ3MJ40 725 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 EEPD1Q7L9B9 569 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 FBXL16Q8N461 479 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 ARRDC4Q8NCT1 418 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 C11orf49Q9H6J7 331 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 LRRC37A2A6NM11 1700 aa25.68■■□□□ 1.7
VPS37C-202ENST00000535818 ANAPC15P60006 121 aa25.67■■□□□ 1.7
VPS37C-202ENST00000535818 FBXO16Q8IX29 292 aaPredicted RBP25.67■■□□□ 1.7
VPS37C-202ENST00000535818 MORC4Q8TE76 937 aa25.67■■□□□ 1.7
VPS37C-202ENST00000535818 LENG1Q96BZ8 264 aaPredicted RBP25.67■■□□□ 1.7
VPS37C-202ENST00000535818 AGXT2Q9BYV1 514 aa25.67■■□□□ 1.7
VPS37C-202ENST00000535818 KATNBL1Q9H079 304 aa25.67■■□□□ 1.7
VPS37C-202ENST00000535818 CCDC196A0A1B0GTZ2 297 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 KBTBD13C9JR72 458 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 DNM1LO00429 736 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 OPLAHO14841 1288 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 MNX1P50219 401 aaPredicted RBP25.66■■□□□ 1.7
VPS37C-202ENST00000535818 PPP2R5BQ15173 497 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 GJC2Q5T442 439 aaPredicted RBP25.66■■□□□ 1.7
VPS37C-202ENST00000535818 SAMD3Q8N6K7 520 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 TAAR1Q96RJ0 339 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 VTA1Q9NP79 307 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 PDRG1Q9NUG6 133 aa25.66■■□□□ 1.7
VPS37C-202ENST00000535818 MAP3K20Q9NYL2 800 aaKnown RBP25.66■■□□□ 1.7
VPS37C-202ENST00000535818 CNTNAP5Q8WYK1 1306 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 hCG_1642624A0A1W2PR95 340 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 GCOM1H8Y6P7 765 aaPredicted RBP25.65■■□□□ 1.7
VPS37C-202ENST00000535818 POLR2MP0CAP2 368 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 CDC27P30260 824 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 HSD17B4P51659 736 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 NOL8Q76FK4 1167 aaKnown RBP25.65■■□□□ 1.7
VPS37C-202ENST00000535818 NSUN6Q8TEA1 469 aaKnown RBP25.65■■□□□ 1.7
VPS37C-202ENST00000535818 DPF3Q92784 378 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 RMDN3Q96TC7 470 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 COL20A1Q9P218 1284 aa25.65■■□□□ 1.7
VPS37C-202ENST00000535818 SEC24BO95487 1268 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 PGK1P00558 417 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 HOXA13P31271 388 aaPredicted RBP25.64■■□□□ 1.7
VPS37C-202ENST00000535818 ADCYAP1R1P41586 468 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 ARHGEF16Q5VV41 709 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 RNF180Q86T96 592 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 GTF3C3Q9Y5Q9 886 aa25.64■■□□□ 1.7
VPS37C-202ENST00000535818 DUSP11O75319 330 aaKnown RBP25.63■■□□□ 1.69
VPS37C-202ENST00000535818 GHRHRQ02643 423 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 TNFAIP2Q03169 654 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 TOB2Q14106 344 aaPredicted RBP25.63■■□□□ 1.69
VPS37C-202ENST00000535818 LRRC41Q15345 812 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 C8orf34Q49A92 452 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 HEATR3Q7Z4Q2 680 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 SPC25Q9HBM1 224 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 SYNRGQ9UMZ2 1314 aa25.63■■□□□ 1.69
VPS37C-202ENST00000535818 NID2Q14112 1375 aa25.62■■□□□ 1.69
VPS37C-202ENST00000535818 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.62■■□□□ 1.69
VPS37C-202ENST00000535818 EIF2AK2P19525 551 aaKnown RBP25.62■■□□□ 1.69
VPS37C-202ENST00000535818 EDNRBP24530 442 aa25.62■■□□□ 1.69
VPS37C-202ENST00000535818 ADD1P35611 737 aaKnown RBP25.62■■□□□ 1.69
VPS37C-202ENST00000535818 CUL5Q93034 780 aa25.62■■□□□ 1.69
VPS37C-202ENST00000535818 PDGFCQ9NRA1 345 aa25.62■■□□□ 1.69
VPS37C-202ENST00000535818 FAM217BQ9NTX9 383 aaPredicted RBP25.62■■□□□ 1.69
VPS37C-202ENST00000535818 ADCY6O43306 1168 aa25.61■■□□□ 1.69
VPS37C-202ENST00000535818 COL6A1P12109 1028 aa25.61■■□□□ 1.69
VPS37C-202ENST00000535818 IQSEC1Q6DN90 963 aa25.61■■□□□ 1.69
VPS37C-202ENST00000535818 TAPT1Q6NXT6 567 aa25.61■■□□□ 1.69
VPS37C-202ENST00000535818 FCHSD1Q86WN1 690 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms