RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CPA1P15085 419 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 ACVR2BQ13705 512 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 SLC30A10Q6XR72 485 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 TMTC3Q6ZXV5 915 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 SPC25Q9HBM1 224 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 BAZ2BQ9UIF8 2168 aaKnown RBP25.28■■□□□ 1.64
SSPN-204ENST00000535504 SOWAHBA6NEL2 793 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 CYTH3O43739 400 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 MYCNP04198 464 aaPredicted RBP25.27■■□□□ 1.64
SSPN-204ENST00000535504 ALDH5A1P51649 535 aaPredicted RBP25.27■■□□□ 1.64
SSPN-204ENST00000535504 PDE4DQ08499 809 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 FBXL16Q8N461 479 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 TRPV1Q8NER1 839 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 CUL5Q93034 780 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 SMCHD1A6NHR9 2005 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 CENPFP49454 3210 aa25.27■■□□□ 1.64
SSPN-204ENST00000535504 KBTBD13C9JR72 458 aa25.26■■□□□ 1.63
SSPN-204ENST00000535504 PLEKHA8P1O95397 391 aa25.26■■□□□ 1.63
SSPN-204ENST00000535504 SNAI1O95863 264 aaPredicted RBP25.26■■□□□ 1.63
SSPN-204ENST00000535504 APOBRQ0VD83 1088 aa25.26■■□□□ 1.63
SSPN-204ENST00000535504 COL9A3Q14050 684 aaPredicted RBP25.26■■□□□ 1.63
SSPN-204ENST00000535504 NOL8Q76FK4 1167 aaKnown RBP25.26■■□□□ 1.63
SSPN-204ENST00000535504 CCDC82Q8N4S0 544 aa25.26■■□□□ 1.63
SSPN-204ENST00000535504 NSUN6Q8TEA1 469 aaKnown RBP25.26■■□□□ 1.63
SSPN-204ENST00000535504 PDRG1Q9NUG6 133 aa25.26■■□□□ 1.63
SSPN-204ENST00000535504 GCOM1H8Y6P7 765 aaPredicted RBP25.25■■□□□ 1.63
SSPN-204ENST00000535504 POLR2MP0CAP2 368 aa25.25■■□□□ 1.63
SSPN-204ENST00000535504 ZNF865P0CJ78 1059 aaPredicted RBP25.25■■□□□ 1.63
SSPN-204ENST00000535504 AKAP17AQ02040 695 aaKnown RBP25.25■■□□□ 1.63
SSPN-204ENST00000535504 LHX8Q68G74 356 aa25.25■■□□□ 1.63
SSPN-204ENST00000535504 SRBD1Q8N5C6 995 aaKnown RBP25.25■■□□□ 1.63
SSPN-204ENST00000535504 UPF2Q9HAU5 1272 aaKnown RBP25.25■■□□□ 1.63
SSPN-204ENST00000535504 VTA1Q9NP79 307 aa25.25■■□□□ 1.63
SSPN-204ENST00000535504 XPNPEP3Q9NQH7 507 aa25.25■■□□□ 1.63
SSPN-204ENST00000535504 BRPF3Q9ULD4 1205 aa25.25■■□□□ 1.63
SSPN-204ENST00000535504 ARHGEF16Q5VV41 709 aa25.24■■□□□ 1.63
SSPN-204ENST00000535504 ANO1Q5XXA6 986 aa25.24■■□□□ 1.63
SSPN-204ENST00000535504 RNF180Q86T96 592 aa25.24■■□□□ 1.63
SSPN-204ENST00000535504 FGD4Q96M96 766 aa25.24■■□□□ 1.63
SSPN-204ENST00000535504 UPF3BQ9BZI7 483 aaKnown RBP25.24■■□□□ 1.63
SSPN-204ENST00000535504 C11orf49Q9H6J7 331 aa25.24■■□□□ 1.63
SSPN-204ENST00000535504 RBM27Q9P2N5 1060 aaKnown RBP25.24■■□□□ 1.63
SSPN-204ENST00000535504 CMTR1Q8N1G2 835 aaKnown RBP25.23■■□□□ 1.63
SSPN-204ENST00000535504 SYTL5Q8TDW5 730 aaPredicted RBP25.23■■□□□ 1.63
SSPN-204ENST00000535504 PAWRQ96IZ0 340 aaKnown RBP25.23■■□□□ 1.63
SSPN-204ENST00000535504 RMDN3Q96TC7 470 aa25.23■■□□□ 1.63
SSPN-204ENST00000535504 MCM3APO60318 1980 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 DNM1LO00429 736 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 PPP1R11O60927 126 aaPredicted RBP25.22■■□□□ 1.63
SSPN-204ENST00000535504 ANKRD1Q15327 319 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 CCDC144BQ3MJ40 725 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 CPLX2Q6PUV4 134 aaKnown RBP25.22■■□□□ 1.63
SSPN-204ENST00000535504 SMARCC2Q8TAQ2 1214 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 DPF3Q92784 378 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 IWS1Q96ST2 819 aa25.22■■□□□ 1.63
SSPN-204ENST00000535504 hCG_1984214I3L0E3 225 aa25.21■■□□□ 1.63
SSPN-204ENST00000535504 TNFAIP2Q03169 654 aa25.21■■□□□ 1.63
SSPN-204ENST00000535504 EEPD1Q7L9B9 569 aa25.21■■□□□ 1.63
SSPN-204ENST00000535504 HEATR3Q7Z4Q2 680 aa25.21■■□□□ 1.63
SSPN-204ENST00000535504 ZNF713Q8N859 430 aaPredicted RBP25.21■■□□□ 1.63
SSPN-204ENST00000535504 AGXT2Q9BYV1 514 aa25.21■■□□□ 1.63
SSPN-204ENST00000535504 CPLX1O14810 134 aa25.2■■□□□ 1.62
SSPN-204ENST00000535504 DUSP11O75319 330 aaKnown RBP25.2■■□□□ 1.62
SSPN-204ENST00000535504 HSD17B4P51659 736 aa25.2■■□□□ 1.62
SSPN-204ENST00000535504 SLC35G1Q2M3R5 365 aa25.2■■□□□ 1.62
SSPN-204ENST00000535504 IQSEC1Q6DN90 963 aa25.2■■□□□ 1.62
SSPN-204ENST00000535504 FBXO16Q8IX29 292 aaPredicted RBP25.2■■□□□ 1.62
SSPN-204ENST00000535504 MORC4Q8TE76 937 aa25.2■■□□□ 1.62
SSPN-204ENST00000535504 PURBQ96QR8 312 aaKnown RBP25.2■■□□□ 1.62
SSPN-204ENST00000535504 FRMPD3Q5JV73 1810 aa25.19■■□□□ 1.62
SSPN-204ENST00000535504 STXBP2Q15833 593 aa25.19■■□□□ 1.62
SSPN-204ENST00000535504 TAAR1Q96RJ0 339 aa25.19■■□□□ 1.62
SSPN-204ENST00000535504 AP5M1Q9H0R1 490 aa25.19■■□□□ 1.62
SSPN-204ENST00000535504 CNTNAP5Q8WYK1 1306 aa25.18■■□□□ 1.62
SSPN-204ENST00000535504 GJC2Q5T442 439 aaPredicted RBP25.18■■□□□ 1.62
SSPN-204ENST00000535504 FCHSD1Q86WN1 690 aa25.18■■□□□ 1.62
SSPN-204ENST00000535504 DIS3LQ8TF46 1054 aaKnown RBP25.18■■□□□ 1.62
SSPN-204ENST00000535504 TBC1D5Q92609 795 aa25.18■■□□□ 1.62
SSPN-204ENST00000535504 GLT8D2Q9H1C3 349 aa25.18■■□□□ 1.62
SSPN-204ENST00000535504 EHMT1Q9H9B1 1298 aa25.18■■□□□ 1.62
SSPN-204ENST00000535504 ZEB2O60315 1214 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 C6orf222P0C671 652 aaPredicted RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 EIF2AK2P19525 551 aaKnown RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 HOXA13P31271 388 aaPredicted RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 NAPAP54920 295 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 GHRHRQ02643 423 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 PPP1R18Q6NYC8 613 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 TRIM22Q8IYM9 498 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 PCSK9Q8NBP7 692 aaKnown RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 SCFD2Q8WU76 684 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 CCDC12Q8WUD4 166 aaPredicted RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 ZNF274Q96GC6 653 aaPredicted RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 PSTPIP2Q9H939 334 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 PXMP2Q9NR77 195 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 NR2E3Q9Y5X4 410 aa25.17■■□□□ 1.62
SSPN-204ENST00000535504 V9GY48 417 aaPredicted RBP25.17■■□□□ 1.62
SSPN-204ENST00000535504 ASTN1O14525 1302 aa25.16■■□□□ 1.62
SSPN-204ENST00000535504 hCG_1642624A0A1W2PR95 340 aa25.16■■□□□ 1.62
SSPN-204ENST00000535504 PGK1P00558 417 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms