RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 OSBPL9Q96SU4 736 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 PRDX5P30044 214 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 AMPD2Q01433 879 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 SH3RF1Q7Z6J0 888 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 IFT20Q8IY31 132 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-232ENST00000535094 CCDC114Q96M63 670 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 CEP104O60308 925 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 CCNE1P24864 410 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 POLR2FP61218 127 aaKnown RBP17.62■□□□□ 0.41
MCF2L-232ENST00000535094 APBA1Q02410 837 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 SEC23AQ15436 765 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 IL17AQ16552 155 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 WDR59Q6PJI9 974 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 ADAT2Q7Z6V5 191 aaKnown RBP17.62■□□□□ 0.41
MCF2L-232ENST00000535094 GIMAP7Q8NHV1 300 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 SHISA4Q96DD7 197 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-232ENST00000535094 ABCC6O95255 1503 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 LRRC53A6NM62 1247 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 JPH2Q9BR39 696 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-232ENST00000535094 STIM2Q9P246 746 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
MCF2L-232ENST00000535094 SMCO2A6NFE2 343 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 SNX12Q9UMY4 172 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 CLSTN1O94985 981 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 TCP1P17987 556 aaKnown RBP17.61■□□□□ 0.41
MCF2L-232ENST00000535094 SEC24CP53992 1094 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 SLC20A2Q08357 652 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 TMEM266Q2M3C6 531 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 THAP9Q9H5L6 903 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 KCNK3O14649 394 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 RBM12Q9NTZ6 932 aaKnown RBP17.61■□□□□ 0.41
MCF2L-232ENST00000535094 PCDHA4Q9UN74 947 aa17.61■□□□□ 0.41
MCF2L-232ENST00000535094 GOLGA8KD6RF30 607 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 DDAH1O94760 285 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 KIAA0753Q2KHM9 967 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 MICALCLQ6ZW33 695 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 IRF2BP1Q8IU81 584 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 GOLPH3Q9H4A6 298 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
MCF2L-232ENST00000535094 CARSP49589 748 aaKnown RBP17.6■□□□□ 0.41
MCF2L-232ENST00000535094 EPHB4P54760 987 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 PFKFB3Q16875 520 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-232ENST00000535094 NAA35Q5VZE5 725 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 DNAAF5Q86Y56 855 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 TGFBRAP1Q8WUH2 860 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-232ENST00000535094 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 CCDC170Q8IYT3 715 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 SNX29Q8TEQ0 813 aa17.6■□□□□ 0.41
MCF2L-232ENST00000535094 AFDNP55196 1824 aaKnown RBP17.6■□□□□ 0.41
MCF2L-232ENST00000535094 KLRF2D3W0D1 207 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 MYO1FO00160 1098 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-232ENST00000535094 SLC1A4P43007 532 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
MCF2L-232ENST00000535094 B4GALNT4Q76KP1 1039 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 SRGNP10124 158 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 TRAPPC10P48553 1259 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 MECOMQ03112 1051 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 PAK2Q13177 524 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 SLC9C1Q4G0N8 1177 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 CCDC121Q6ZUS5 278 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 LSM14BQ9BX40 385 aaKnown RBP17.59■□□□□ 0.41
MCF2L-232ENST00000535094 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-232ENST00000535094 USP17L2Q6R6M4 530 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 DHTKD1Q96HY7 919 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-232ENST00000535094 VIPAS39Q9H9C1 493 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
MCF2L-232ENST00000535094 GBP6Q6ZN66 633 aa17.58■□□□□ 0.41
MCF2L-232ENST00000535094 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 KRT79Q5XKE5 535 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 FNBP4Q8N3X1 1017 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 UHMK1Q8TAS1 419 aaKnown RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 AP1M1Q9BXS5 423 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 HIBADHP31937 336 aaKnown RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 DCAF17Q5H9S7 520 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 PAPD7Q5XG87 772 aaKnown RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 TRMT1LQ7Z2T5 733 aaKnown RBP17.58■□□□□ 0.4
MCF2L-232ENST00000535094 CPLX4Q7Z7G2 160 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 DNAJC7Q99615 494 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 GPCPD1Q9NPB8 672 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms