RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 SLC4A7Q9Y6M7 1214 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 DUSP11O75319 330 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 GNASQ5JWF2 1037 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 KRT40Q6A162 431 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 FAM133AQ8N9E0 248 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 DCAF4Q8WV16 495 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 AGBL1Q96MI9 1066 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 UIMC1Q96RL1 719 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 CTDP1Q9Y5B0 961 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 PCDHA11Q9Y5I1 949 aa11.88□□□□□ -0.51
CLSTN3-203ENST00000534830 ADCY6O43306 1168 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 CCL23P55773 120 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 NKX3-2P78367 333 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 ACVR2BQ13705 512 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 ANKRD35Q8N283 1001 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 HLA-CQ95604 372 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 TTC14Q96N46 770 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 ABHD16BQ9H3Z7 469 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-203ENST00000534830 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 PI4K2BG5E9Z4 385 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 HAND2P61296 217 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 ARMCX2Q7L311 632 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 ASTN1O14525 1302 aa11.86□□□□□ -0.51
CLSTN3-203ENST00000534830 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CTAGE5O15320 804 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CD4P01730 458 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 ICAM1P05362 532 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CA3P07451 260 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 PDHBP11177 359 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 POU3F3P20264 500 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 PDE4AP27815 886 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 NT5C2P49902 561 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 SNAP25P60880 206 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 MUM1L1Q5H9M0 696 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CWC27Q6UX04 472 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 MFSD6Q6ZSS7 791 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 MORC4Q8TE76 937 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 DSCC1Q9BVC3 393 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 UPF3AQ9H1J1 476 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 CD320Q9NPF0 282 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 TRANK1O15050 2925 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 NEDD4P46934 1319 aa11.85□□□□□ -0.51
CLSTN3-203ENST00000534830 EPOPA6NHQ4 379 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 HIP1O00291 1037 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 ALAS1P13196 640 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 GJA9P57773 515 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 IKQ13123 557 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 SYDE2Q5VT97 1194 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 ARNTL2Q8WYA1 636 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 ANKS1AQ92625 1134 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 IL25Q9H293 177 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 RNF41Q9H4P4 317 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 TOMM22Q9NS69 142 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
CLSTN3-203ENST00000534830 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
CLSTN3-203ENST00000534830 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 ASB14A6NK59 587 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 ZNF213O14771 459 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 SLC16A2P36021 539 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 BEX3Q00994 111 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 NHLH1Q02575 133 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 DGKHQ86XP1 1220 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 ESR2Q92731 530 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 SCLYQ96I15 445 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms