RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 BEX3Q00994 111 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 FSCN1Q16658 493 aaKnown RBP22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 DUSP28Q4G0W2 176 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 ASPRV1Q53RT3 343 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 SLC30A10Q6XR72 485 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 RNF207Q6ZRF8 634 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 NOL8Q76FK4 1167 aaKnown RBP22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 DNERQ8NFT8 737 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 TNKSO95271 1327 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 LCTP09848 1927 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 DYNC1LI2O43237 492 aaPredicted RBP22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 ZEB2O60315 1214 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 RPS6P62753 249 aaKnown RBP22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 SMAD3P84022 425 aaKnown RBP22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 FPGSQ05932 587 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 KIAA1211Q6ZU35 1233 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 EEPD1Q7L9B9 569 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 FAM126BQ8IXS8 530 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 VTI1AQ96AJ9 217 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 UBA5Q9GZZ9 404 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 STXBP5LQ9Y2K9 1186 aa22.04■■□□□ 1.12
NDUFS3-213ENST00000534716 CD4P01730 458 aa22.03■■□□□ 1.12
NDUFS3-213ENST00000534716 EPHB4P54760 987 aa22.03■■□□□ 1.12
NDUFS3-213ENST00000534716 MFSD5Q6N075 450 aa22.03■■□□□ 1.12
NDUFS3-213ENST00000534716 ADGRF4Q8IZF3 695 aa22.03■■□□□ 1.12
NDUFS3-213ENST00000534716 RUFY2Q8WXA3 655 aa22.03■■□□□ 1.12
NDUFS3-213ENST00000534716 CHMLP26374 656 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 CALML3P27482 149 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 TMEM63BQ5T3F8 832 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 CXCL17Q6UXB2 119 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 UBAC1Q9BSL1 405 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.12
NDUFS3-213ENST00000534716 TLR3O15455 904 aaKnown RBP22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 PTGS1P23219 599 aa22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 CDC37Q16543 378 aaPredicted RBP22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 CPVLQ9H3G5 476 aa22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 GRIN2DO15399 1336 aa22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 ABCB11O95342 1321 aa22.01■■□□□ 1.11
NDUFS3-213ENST00000534716 B4DLN1 442 aa22■■□□□ 1.11
NDUFS3-213ENST00000534716 NKRFO15226 690 aaKnown RBP eCLIP22■■□□□ 1.11
NDUFS3-213ENST00000534716 PARP1P09874 1014 aaKnown RBP22■■□□□ 1.11
NDUFS3-213ENST00000534716 MRPL12P52815 198 aaKnown RBP22■■□□□ 1.11
NDUFS3-213ENST00000534716 ITGA7Q13683 1181 aa22■■□□□ 1.11
NDUFS3-213ENST00000534716 SEC23AQ15436 765 aa22■■□□□ 1.11
NDUFS3-213ENST00000534716 IFIT1BQ5T764 474 aaKnown RBP22■■□□□ 1.11
NDUFS3-213ENST00000534716 U3KPZ7 1027 aaPredicted RBP22■■□□□ 1.11
NDUFS3-213ENST00000534716 PDE4DQ08499 809 aa21.99■■□□□ 1.11
NDUFS3-213ENST00000534716 USH1GQ495M9 461 aa21.99■■□□□ 1.11
NDUFS3-213ENST00000534716 RNPC3Q96LT9 517 aaKnown RBP21.99■■□□□ 1.11
NDUFS3-213ENST00000534716 JMJD4Q9H9V9 463 aa21.99■■□□□ 1.11
NDUFS3-213ENST00000534716 SGSM2O43147 1006 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 CYP21A2P08686 494 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 PPIGQ13427 754 aaKnown RBP eCLIP21.98■■□□□ 1.114e-7■□□□□ 11.3
NDUFS3-213ENST00000534716 ZNF697Q5TEC3 545 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 GUCD1Q96NT3 240 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 POLR3EQ9NVU0 708 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 A0A0C4DFX4 3053 aa21.98■■□□□ 1.11
NDUFS3-213ENST00000534716 CDH23Q9H251 3354 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 CPT1AP50416 773 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 IRX6P78412 446 aaPredicted RBP21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 PTH1RQ03431 593 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 TRDNQ13061 729 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 QRICH1Q2TAL8 776 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 MCF2L2Q86YR7 1114 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 TMEM199Q8N511 208 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 SCFD2Q8WU76 684 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 MTMR8Q96EF0 704 aa21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 MRPL11Q9Y3B7 192 aaKnown RBP21.97■■□□□ 1.11
NDUFS3-213ENST00000534716 TMEM265A0A087WTH1 108 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 PURAQ00577 322 aaKnown RBP21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 GHRHRQ02643 423 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 RASIP1Q5U651 963 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 C16orf59Q7L2K0 433 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 FBXO11Q86XK2 927 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 SYTL5Q8TDW5 730 aaPredicted RBP21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 TBC1D5Q92609 795 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 IWS1Q96ST2 819 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
NDUFS3-213ENST00000534716 PALM3A6NDB9 673 aaPredicted RBP21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 A6NJR5 290 aa21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 KLRF2D3W0D1 207 aa21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 CSF2RAP15509 400 aa21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 PPP2R5BQ15173 497 aa21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 NSUN6Q8TEA1 469 aaKnown RBP21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.95■■□□□ 1.12e-7■□□□□ 9.3
NDUFS3-213ENST00000534716 SEMA6BQ9H3T3 888 aa21.95■■□□□ 1.1
NDUFS3-213ENST00000534716 PSMC6P62333 389 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 BRDTQ58F21 947 aaPredicted RBP21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 TMEM240Q5SV17 173 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 OR6J1Q8NGC5 347 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 MAP4K1Q92918 833 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 AMNQ9BXJ7 453 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 ALDH8A1Q9H2A2 487 aaPredicted RBP21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 MAP3K20Q9NYL2 800 aaKnown RBP21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 COL20A1Q9P218 1284 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 CUL9Q8IWT3 2517 aa21.94■■□□□ 1.1
NDUFS3-213ENST00000534716 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms