RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 COQ6Q9Y2Z9 468 aa4.63□□□□□ -1.67
ME3-211ENST00000534638 EMC9Q9Y3B6 208 aa4.63□□□□□ -1.67
ME3-211ENST00000534638 PCDHGC5Q9Y5F6 944 aa4.63□□□□□ -1.67
ME3-211ENST00000534638 PCDHA8Q9Y5H6 950 aa4.63□□□□□ -1.67
ME3-211ENST00000534638 CBX4O00257 560 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 MAFGO15525 162 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 XPOTO43592 962 aaKnown RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 PIP5K1CO60331 668 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 IL33O95760 270 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 SOD2P04179 222 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 FURINP09958 794 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 KCNA6P17658 529 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 CD247P20963 164 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 HALP42357 657 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 HTR3AP46098 478 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 HTRA3P83110 453 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 GUCY1A3Q02108 690 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 DOC2BQ14184 412 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 GBX1Q14549 363 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 INAVAQ3KP66 663 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 PRAMEF13Q5VWM6 474 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 PGM2L1Q6PCE3 622 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 C1orf228Q6PIY5 440 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 MTDHQ86UE4 582 aaKnown RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 CACTIN-AS1Q8N1I8 211 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 IGSF22Q8N9C0 903 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 CLRN3Q8NCR9 226 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 C1orf162Q8NEQ5 155 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 SMARCC1Q92922 1105 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 LENG1Q96BZ8 264 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 AHCYL2Q96HN2 611 aaKnown RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 SOX17Q9H6I2 414 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 NOL6Q9H6R4 1146 aaKnown RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 GP6Q9HCN6 339 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 PLCB1Q9NQ66 1216 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 PRDM10Q9NQV6 1147 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 C14orf119Q9NWQ9 140 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 H2AFY2Q9P0M6 372 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 WHRNQ9P202 907 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 RCAN3Q9UKA8 241 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 PNMA8BQ9ULN7 279 aaPredicted RBP4.62□□□□□ -1.67
ME3-211ENST00000534638 PHTF1Q9UMS5 762 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 ANKRD6Q9Y2G4 727 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 GIT1Q9Y2X7 761 aa4.62□□□□□ -1.67
ME3-211ENST00000534638 GAS7O60861 476 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 H2AFYO75367 372 aaKnown RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 VAMP4O75379 141 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 DEAF1O75398 565 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 DLGAP3O95886 979 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 LTFP02788 710 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 CYP2C19P33261 490 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 NTF4P34130 210 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 RECQLP46063 649 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 ARL4DP49703 201 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 RBM10P98175 930 aaKnown RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 RING1Q06587 406 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 CHAF1AQ13111 956 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 STK3Q13188 491 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 KLF1Q13351 362 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 ADGRE1Q14246 886 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 SLC6A19Q695T7 634 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 DENND5AQ6IQ26 1287 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 MAMDC2Q7Z304 686 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 MRPL41Q8IXM3 137 aaKnown RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 CMIPQ8IY22 773 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 C7orf61Q8IZ16 206 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 ENAHQ8N8S7 591 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 FBXO41Q8TF61 875 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 HSPBAP1Q96EW2 488 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 KLHDC7BQ96G42 594 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 C1orf159Q96HA4 380 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 ZDHHC15Q96MV8 337 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 MENTQ9BUN1 341 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 AS3MTQ9HBK9 375 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 CYP26B1Q9NR63 512 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 USP21Q9UK80 565 aa4.61□□□□□ -1.67
ME3-211ENST00000534638 GPR55Q9Y2T6 319 aaPredicted RBP4.61□□□□□ -1.67
ME3-211ENST00000534638 LOC100289279A0A1B0GTE1 492 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 ANO9A1A5B4 782 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 A6NNZ2 444 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 B4E1Z4 1266 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 FSCN2O14926 492 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 DDX3YO15523 660 aaKnown RBP4.6□□□□□ -1.67
ME3-211ENST00000534638 SLC26A4O43511 780 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 PCDHGA12O60330 932 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 AOC2O75106 756 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 SRGAP2CP0DJJ0 459 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 U2AF1L5P0DN76 240 aaPredicted RBP4.6□□□□□ -1.67
ME3-211ENST00000534638 ITGA4P13612 1032 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 LSSP48449 732 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 PPM1FP49593 454 aaPredicted RBP4.6□□□□□ -1.67
ME3-211ENST00000534638 PIP4K2BP78356 416 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 U2AF1Q01081 240 aaKnown RBP eCLIP4.6□□□□□ -1.67
ME3-211ENST00000534638 NRG1Q02297 640 aaPredicted RBP4.6□□□□□ -1.67
ME3-211ENST00000534638 CYP4F3Q08477 520 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 MAP4K2Q12851 820 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 ZNF267Q14586 743 aaPredicted RBP4.6□□□□□ -1.67
ME3-211ENST00000534638 MBTPS1Q14703 1052 aa4.6□□□□□ -1.67
ME3-211ENST00000534638 LONRF1Q17RB8 773 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms