RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FEM1BQ9UK73 627 aa15.09■□□□□ 0.01
BEST1-208ENST00000534553 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
BEST1-208ENST00000534553 NFE2L3Q9Y4A8 694 aa15.09■□□□□ 0.01
BEST1-208ENST00000534553 TBX3O15119 743 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 TDP2O95551 362 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 ZNF18P17022 549 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 TECP42680 631 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 TXKP42681 527 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 PTGER2P43116 358 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 UBASH3AP57075 661 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 KRT79Q5XKE5 535 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 KIAA1524Q8TCG1 905 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 LPAR1Q92633 364 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 MBOAT7Q96N66 472 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 ANO3Q9BYT9 981 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 FANCLQ9NW38 375 aa15.08■□□□□ 0.01
BEST1-208ENST00000534553 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0
BEST1-208ENST00000534553 MEIS2O14770 477 aa15.08■□□□□ 0
BEST1-208ENST00000534553 GMPSP49915 693 aaPredicted RBP15.08■□□□□ 0
BEST1-208ENST00000534553 STIM1Q13586 685 aa15.08■□□□□ 0
BEST1-208ENST00000534553 CUL4BQ13620 913 aa15.08■□□□□ 0
BEST1-208ENST00000534553 MICALL2Q8IY33 904 aa15.08■□□□□ 0
BEST1-208ENST00000534553 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0
BEST1-208ENST00000534553 CTAGE1Q96RT6 745 aa15.08■□□□□ 0
BEST1-208ENST00000534553 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
BEST1-208ENST00000534553 MTRQ99707 1265 aa15.08■□□□□ 0
BEST1-208ENST00000534553 KCNF1Q9H3M0 494 aa15.08■□□□□ 0
BEST1-208ENST00000534553 KDM3AQ9Y4C1 1321 aa15.07■□□□□ 0
BEST1-208ENST00000534553 SLC37A4O43826 429 aa15.07■□□□□ 0
BEST1-208ENST00000534553 MARCH6O60337 910 aa15.07■□□□□ 0
BEST1-208ENST00000534553 OFD1O75665 1012 aa15.07■□□□□ 0
BEST1-208ENST00000534553 PLCG1P19174 1290 aa15.07■□□□□ 0
BEST1-208ENST00000534553 CDK11BP21127 795 aaKnown RBP15.07■□□□□ 0
BEST1-208ENST00000534553 CDC25AP30304 524 aa15.07■□□□□ 0
BEST1-208ENST00000534553 SREBF1P36956 1147 aa15.07■□□□□ 0
BEST1-208ENST00000534553 ECE1P42892 770 aa15.07■□□□□ 0
BEST1-208ENST00000534553 DCAF15Q66K64 600 aa15.07■□□□□ 0
BEST1-208ENST00000534553 LRRC8AQ8IWT6 810 aa15.07■□□□□ 0
BEST1-208ENST00000534553 NT5C3AQ9H0P0 336 aa15.07■□□□□ 0
BEST1-208ENST00000534553 RANBP17Q9H2T7 1088 aaKnown RBP15.07■□□□□ 0
BEST1-208ENST00000534553 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
BEST1-208ENST00000534553 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
BEST1-208ENST00000534553 RWDD2AQ9UIY3 292 aa15.07■□□□□ 0
BEST1-208ENST00000534553 PNMA2Q9UL42 364 aa15.07■□□□□ 0
BEST1-208ENST00000534553 PP2D1A8MPX8 630 aa15.06■□□□□ 0
BEST1-208ENST00000534553 H7C1D1 291 aa15.06■□□□□ 0
BEST1-208ENST00000534553 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
BEST1-208ENST00000534553 RHOBTB3O94955 611 aa15.06■□□□□ 0
BEST1-208ENST00000534553 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 0
BEST1-208ENST00000534553 SPAG1Q07617 926 aa15.06■□□□□ 0
BEST1-208ENST00000534553 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
BEST1-208ENST00000534553 ACER1Q8TDN7 264 aa15.06■□□□□ 0
BEST1-208ENST00000534553 CRYGNQ8WXF5 182 aa15.06■□□□□ 0
BEST1-208ENST00000534553 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
BEST1-208ENST00000534553 C7orf25Q9BPX7 421 aa15.06■□□□□ 0
BEST1-208ENST00000534553 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
BEST1-208ENST00000534553 PCDHA12Q9UN75 941 aa15.06■□□□□ 0
BEST1-208ENST00000534553 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
BEST1-208ENST00000534553 PPP1R3GB7ZBB8 358 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L15C9J2P7 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L11C9JVI0 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L18D6R9N7 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L22D6RA61 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L19D6RCP7 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L20D6RJB6 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 EDIL3O43854 480 aa15.06■□□□□ 0
BEST1-208ENST00000534553 ATP1A3P13637 1013 aa15.06■□□□□ 0
BEST1-208ENST00000534553 ARHGAP4P98171 946 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L24Q0WX57 530 aa15.06■□□□□ 0
BEST1-208ENST00000534553 PAK1Q13153 545 aa15.06■□□□□ 0
BEST1-208ENST00000534553 NOLC1Q14978 699 aaKnown RBP eCLIP15.06■□□□□ 0
BEST1-208ENST00000534553 Q4G0T1 1027 aa15.06■□□□□ 0
BEST1-208ENST00000534553 FAM83BQ5T0W9 1011 aa15.06■□□□□ 0
BEST1-208ENST00000534553 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
BEST1-208ENST00000534553 MIGA2Q7L4E1 593 aa15.06■□□□□ 0
BEST1-208ENST00000534553 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
BEST1-208ENST00000534553 KCTD17Q8N5Z5 321 aa15.06■□□□□ 0
BEST1-208ENST00000534553 TEPSINQ96N21 525 aa15.06■□□□□ 0
BEST1-208ENST00000534553 BLZF1Q9H2G9 400 aa15.06■□□□□ 0
BEST1-208ENST00000534553 KCNMB3Q9NPA1 279 aa15.06■□□□□ 0
BEST1-208ENST00000534553 NRBP1Q9UHY1 535 aa15.06■□□□□ 0
BEST1-208ENST00000534553 MRPL11Q9Y3B7 192 aaKnown RBP15.06■□□□□ 0
BEST1-208ENST00000534553 PHF20L1A8MW92 1017 aa15.05■□□□□ -0
BEST1-208ENST00000534553 WDR46O15213 610 aaKnown RBP15.05■□□□□ -0
BEST1-208ENST00000534553 CIITAP33076 1130 aa15.05■□□□□ -0
BEST1-208ENST00000534553 KIF4BQ2VIQ3 1234 aa15.05■□□□□ -0
BEST1-208ENST00000534553 CCDC144BQ3MJ40 725 aa15.05■□□□□ -0
BEST1-208ENST00000534553 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
BEST1-208ENST00000534553 HYIQ5T013 277 aa15.05■□□□□ -0
BEST1-208ENST00000534553 CNNM4Q6P4Q7 775 aa15.05■□□□□ -0
BEST1-208ENST00000534553 SV2BQ7L1I2 683 aa15.05■□□□□ -0
BEST1-208ENST00000534553 FILIP1Q7Z7B0 1213 aa15.05■□□□□ -0
BEST1-208ENST00000534553 ANKRD20A12PQ8NF67 263 aa15.05■□□□□ -0
BEST1-208ENST00000534553 FEZ1Q99689 392 aa15.05■□□□□ -0
BEST1-208ENST00000534553 TRIM9Q9C026 710 aa15.05■□□□□ -0
BEST1-208ENST00000534553 KIAA1683Q9H0B3 1180 aa15.05■□□□□ -0
BEST1-208ENST00000534553 RABGAP1Q9Y3P9 1069 aa15.05■□□□□ -0
BEST1-208ENST00000534553 PPP2R3BQ9Y5P8 575 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms