RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 MMP19Q99542 508 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 MSRB2Q9Y3D2 182 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 C7orf72A4D263 438 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 TSPAN15O95858 294 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 KRT1P04264 644 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 TACR1P25103 407 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 PPP2R2AP63151 447 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 SF1Q15637 639 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 PKN1Q16512 942 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 MBLAC2Q68D91 279 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 KREMEN2Q8NCW0 462 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 KCNN1Q92952 543 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 SGSM3Q96HU1 749 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 KLHL14Q9P2G3 628 aa6.21□□□□□ -1.42
ATPAF1-211ENST00000534216 TEX51A0A1B0GUA7 166 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 A0A1W2PQJ5 194 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 ETV2O00321 342 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 ABLIM1O14639 778 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 NPHS1O60500 1241 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 PPP1R11O60927 126 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 SEMA7AO75326 666 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 CPP00450 1065 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 GLDCP23378 1020 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 ECI1P42126 302 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 GRIA2P42262 883 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 GFRA1P56159 465 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 CBX2Q14781 532 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 RAB3GAP1Q15042 981 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 BICRALQ6AI39 1079 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 SIRPGQ9P1W8 387 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 GULP1Q9UBP9 304 aa6.2□□□□□ -1.42
ATPAF1-211ENST00000534216 IQCA1LA6NCM1 817 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 ARNTLO00327 626 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 NFIBO00712 420 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 PDPK1O15530 556 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 SRGAP3O43295 1099 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 DBHP09172 617 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 VIPR1P32241 457 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 KCNJ6P48051 423 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 TMEM62Q0P6H9 643 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 SERINC3Q13530 473 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 NR1I3Q14994 352 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 INF2Q27J81 1249 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 PRSS53Q2L4Q9 553 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 E4F1Q66K89 784 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 OLFML2BQ68BL8 750 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 TMEM132EQ6IEE7 984 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 RPTNQ6XPR3 784 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 CCDC103Q8IW40 242 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 TMEM145Q8NBT3 493 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 SREK1Q8WXA9 508 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 ZNF669Q96BR6 464 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 C1orf159Q96HA4 380 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 MTA3Q9BTC8 594 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 CCDC113Q9H0I3 377 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 FBLN5Q9UBX5 448 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 TMEFF2Q9UIK5 374 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 RWDD3Q9Y3V2 267 aa6.19□□□□□ -1.42
ATPAF1-211ENST00000534216 CYBBP04839 570 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 RAP1GAPP47736 663 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 DLG4P78352 724 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 RBM10P98175 930 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 RASGRF1Q13972 1273 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 HSP90AA2PQ14568 343 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 TESK1Q15569 626 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 ACBD5Q5T8D3 534 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 IQCEQ6IPM2 695 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 DENND5AQ6IQ26 1287 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 PAQR3Q6TCH7 311 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 ATG14Q6ZNE5 492 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 DPF3Q92784 378 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 GCM1Q9NP62 436 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 ARHGEF4Q9NR80 690 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 SIRT5Q9NXA8 310 aa6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 MBD1Q9UIS9 605 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-211ENST00000534216 CCDC85CA6NKD9 419 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 MEFVO15553 781 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 GLI4P10075 376 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 MAPKAPK2P49137 400 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 MAP4K2Q12851 820 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 KCNAB2Q13303 367 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 PLEKHN1Q494U1 663 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 SLC35F1Q5T1Q4 408 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 SPATC1Q76KD6 591 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 TMC6Q7Z403 805 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 PPIL6Q8IXY8 311 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 KCTD13Q8WZ19 329 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 DIO2Q92813 273 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 AARSD1Q9BTE6 412 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
ATPAF1-211ENST00000534216 CNTD2Q9H8S5 307 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms