RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 PDE4DQ08499 809 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 LRRC26Q2I0M4 334 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 HABP4Q5JVS0 413 aaKnown RBP17.95■□□□□ 0.46
UBXN1-217ENST00000534176 ANO1Q5XXA6 986 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 SYNE3Q6ZMZ3 975 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 NSUN6Q8TEA1 469 aaKnown RBP17.95■□□□□ 0.46
UBXN1-217ENST00000534176 GLT1D1Q96MS3 346 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 IWS1Q96ST2 819 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 AP5M1Q9H0R1 490 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 PGK1P00558 417 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 C6orf222P0C671 652 aaPredicted RBP17.94■□□□□ 0.46
UBXN1-217ENST00000534176 ADCYAP1R1P41586 468 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 GHRHRQ02643 423 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
UBXN1-217ENST00000534176 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 ZNF654Q8IZM8 581 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 LY9Q9HBG7 655 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
UBXN1-217ENST00000534176 EDNRBP24530 442 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 ACLYP53396 1101 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 ANTXR2P58335 489 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 RTP1P59025 263 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 SLC30A10Q6XR72 485 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 NOL8Q76FK4 1167 aaKnown RBP17.93■□□□□ 0.46
UBXN1-217ENST00000534176 SGMS1Q86VZ5 419 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 TEX2Q8IWB9 1127 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 SCFD2Q8WU76 684 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 SPZ1Q9BXG8 430 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 VAT1LQ9HCJ6 419 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 STARD7Q9NQZ5 370 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
UBXN1-217ENST00000534176 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
UBXN1-217ENST00000534176 ALPK3Q96L96 1907 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 A0A1W2PQ45 241 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 A0A1W2PQY0 241 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 RCAN1P53805 252 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 ATN1P54259 1190 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 GNASQ5JWF2 1037 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 TLK2Q86UE8 772 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 LBHD1Q9BQE6 289 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 SEC63Q9UGP8 760 aaKnown RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 GNEQ9Y223 722 aaKnown RBP17.92■□□□□ 0.46
UBXN1-217ENST00000534176 MYH6P13533 1939 aa17.92■□□□□ 0.46
UBXN1-217ENST00000534176 CPT1AP50416 773 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 KCNA10Q16322 511 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
UBXN1-217ENST00000534176 TAPT1Q6NXT6 567 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
UBXN1-217ENST00000534176 RRP36Q96EU6 259 aaKnown RBP17.91■□□□□ 0.46
UBXN1-217ENST00000534176 GDF15Q99988 308 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 PRO3102Q9H379 93 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 CPVLQ9H3G5 476 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 ATP11BQ9Y2G3 1177 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 MCM3APO60318 1980 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 ASTN1O14525 1302 aa17.91■□□□□ 0.46
UBXN1-217ENST00000534176 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 KPNA6O60684 536 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 HSD17B4P51659 736 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 TTLL4Q14679 1199 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 STXBP2Q15833 593 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 ANKRD33Q7Z3H0 272 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 FBXO16Q8IX29 292 aaPredicted RBP17.9■□□□□ 0.46
UBXN1-217ENST00000534176 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
UBXN1-217ENST00000534176 RMDN3Q96TC7 470 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 WDR11Q9BZH6 1224 aa17.9■□□□□ 0.46
UBXN1-217ENST00000534176 RBM28Q9NW13 759 aaKnown RBP17.9■□□□□ 0.46
UBXN1-217ENST00000534176 A0A0U1RQG5 324 aaPredicted RBP17.89■□□□□ 0.45
UBXN1-217ENST00000534176 CFBP00751 764 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 ASGR1P07306 291 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 PSMA5P28066 241 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 FSCN1Q16658 493 aaKnown RBP17.89■□□□□ 0.45
UBXN1-217ENST00000534176 ARHGEF16Q5VV41 709 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 KCNV1Q6PIU1 500 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 FERMT2Q96AC1 680 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 POLR3EQ9NVU0 708 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
UBXN1-217ENST00000534176 ZMYND8Q9ULU4 1186 aaPredicted RBP17.89■□□□□ 0.45
UBXN1-217ENST00000534176 LRRC37A2A6NM11 1700 aa17.89■□□□□ 0.45
UBXN1-217ENST00000534176 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
UBXN1-217ENST00000534176 EIF3JO75822 258 aaKnown RBP17.88■□□□□ 0.45
UBXN1-217ENST00000534176 STAM2O75886 525 aa17.88■□□□□ 0.45
UBXN1-217ENST00000534176 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
UBXN1-217ENST00000534176 SMPD1P17405 629 aa17.88■□□□□ 0.45
UBXN1-217ENST00000534176 EEPD1Q7L9B9 569 aa17.88■□□□□ 0.45
UBXN1-217ENST00000534176 KCNB2Q92953 911 aa17.88■□□□□ 0.45
UBXN1-217ENST00000534176 PIGSQ96S52 555 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms