RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 PTGS1P23219 599 aa20.53■□□□□ 0.88
CAPN5-207ENST00000533889 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
CAPN5-207ENST00000533889 FPGSQ05932 587 aa20.53■□□□□ 0.88
CAPN5-207ENST00000533889 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
CAPN5-207ENST00000533889 MTMR10Q9NXD2 777 aa20.53■□□□□ 0.88
CAPN5-207ENST00000533889 LAMA2P24043 3122 aaKnown RBP20.52■□□□□ 0.88
CAPN5-207ENST00000533889 LOC102724159A0A0B4J2E5 919 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 TLR3O15455 904 aaKnown RBP20.52■□□□□ 0.88
CAPN5-207ENST00000533889 CABYRO75952 493 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 TIMP1P01033 207 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 PARP1P09874 1014 aaKnown RBP20.52■□□□□ 0.88
CAPN5-207ENST00000533889 PDE4DQ08499 809 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 PWP2Q15269 919 aaKnown RBP20.52■□□□□ 0.88
CAPN5-207ENST00000533889 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.88
CAPN5-207ENST00000533889 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 TMEM63BQ5T3F8 832 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 VAT1LQ9HCJ6 419 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 Q9Y3F1 56 aa20.52■□□□□ 0.88
CAPN5-207ENST00000533889 EPHB4P54760 987 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 TRDNQ13061 729 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 DUSP28Q4G0W2 176 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
CAPN5-207ENST00000533889 FAM109BQ6ICB4 259 aaPredicted RBP20.51■□□□□ 0.87
CAPN5-207ENST00000533889 ADGRF4Q8IZF3 695 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 WDR11Q9BZH6 1224 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 TBX21Q9UL17 535 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 LCTP09848 1927 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 RAD50Q92878 1312 aa20.51■□□□□ 0.87
CAPN5-207ENST00000533889 B4DLN1 442 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 CHMLP26374 656 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 MRPL12P52815 198 aaKnown RBP20.5■□□□□ 0.87
CAPN5-207ENST00000533889 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 RNPC3Q96LT9 517 aaKnown RBP20.5■□□□□ 0.87
CAPN5-207ENST00000533889 FAM161BQ96MY7 647 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 LRRC37A2A6NM11 1700 aa20.5■□□□□ 0.87
CAPN5-207ENST00000533889 ITGA7Q13683 1181 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 ZNF697Q5TEC3 545 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 MFSD5Q6N075 450 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 FAM126BQ8IXS8 530 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 SLC17A8Q8NDX2 589 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 STXBP5LQ9Y2K9 1186 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 U3KPZ7 1027 aaPredicted RBP20.49■□□□□ 0.87
CAPN5-207ENST00000533889 ABCB11O95342 1321 aa20.49■□□□□ 0.87
CAPN5-207ENST00000533889 PTH1RQ03431 593 aa20.48■□□□□ 0.87
CAPN5-207ENST00000533889 CYB5R4Q7L1T6 521 aa20.48■□□□□ 0.87
CAPN5-207ENST00000533889 FBXO11Q86XK2 927 aa20.48■□□□□ 0.87
CAPN5-207ENST00000533889 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
CAPN5-207ENST00000533889 COL6A3P12111 3177 aa20.48■□□□□ 0.87
CAPN5-207ENST00000533889 RBM47A0AV96 593 aaKnown RBP20.47■□□□□ 0.87
CAPN5-207ENST00000533889 PSMC6P62333 389 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 SMAD3P84022 425 aaKnown RBP20.47■□□□□ 0.87
CAPN5-207ENST00000533889 QRICH1Q2TAL8 776 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 TMEM199Q8N511 208 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 SLC43A3Q8NBI5 491 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 TBC1D5Q92609 795 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 JMJD4Q9H9V9 463 aa20.47■□□□□ 0.87
CAPN5-207ENST00000533889 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
CAPN5-207ENST00000533889 CD4P01730 458 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 MYL3P08590 195 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 CYP21A2P08686 494 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 EDNRBP24530 442 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 CPT1AP50416 773 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 PPIGQ13427 754 aaKnown RBP eCLIP20.46■□□□□ 0.87
CAPN5-207ENST00000533889 PPP2R5BQ15173 497 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 SEC23AQ15436 765 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 BRDTQ58F21 947 aaPredicted RBP20.46■□□□□ 0.87
CAPN5-207ENST00000533889 SCFD2Q8WU76 684 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 SEZ6LQ9BYH1 1024 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 MAF1Q9H063 256 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
CAPN5-207ENST00000533889 POLR3EQ9NVU0 708 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 GRIN2DO15399 1336 aa20.46■□□□□ 0.87
CAPN5-207ENST00000533889 ERICH2A1L162 156 aa20.45■□□□□ 0.86
CAPN5-207ENST00000533889 KLRF2D3W0D1 207 aa20.45■□□□□ 0.86
CAPN5-207ENST00000533889 IFIT3O14879 490 aaKnown RBP20.45■□□□□ 0.86
CAPN5-207ENST00000533889 RALYLQ86SE5 291 aaKnown RBP20.45■□□□□ 0.86
CAPN5-207ENST00000533889 STAG2Q8N3U4 1231 aa20.45■□□□□ 0.86
CAPN5-207ENST00000533889 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPN5-207ENST00000533889 SGSM2O43147 1006 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 TXNP10599 105 aaKnown RBP20.44■□□□□ 0.86
CAPN5-207ENST00000533889 CSF2RAP15509 400 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 CYP2C18P33260 490 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 SYTL5Q8TDW5 730 aaPredicted RBP20.44■□□□□ 0.86
CAPN5-207ENST00000533889 NSUN6Q8TEA1 469 aaKnown RBP20.44■□□□□ 0.86
CAPN5-207ENST00000533889 TAAR1Q96RJ0 339 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPN5-207ENST00000533889 AMNQ9BXJ7 453 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 TRPV6Q9H1D0 765 aa20.44■□□□□ 0.86
CAPN5-207ENST00000533889 TTLL4Q14679 1199 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 NCOA7Q8NI08 942 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 GUCD1Q96NT3 240 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 SEMA6BQ9H3T3 888 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 HIPK3Q9H422 1215 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 MYH6P13533 1939 aa20.43■□□□□ 0.86
CAPN5-207ENST00000533889 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
CAPN5-207ENST00000533889 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms