RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MOGSQ13724 837 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 KIAA1755Q5JYT7 1200 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 ZIC5Q96T25 663 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 PTPN18Q99952 460 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 BTBD19C9JJ37 291 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 PDHXO00330 501 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 MMP1P03956 469 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 OSBPP22059 807 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 COG2Q14746 738 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 KRT40Q6A162 431 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 FERMT3Q86UX7 667 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 FLOT1O75955 427 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 STAT2P52630 851 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 MFSD10Q14728 455 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 CMTR1Q8N1G2 835 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 CHURC1Q8WUH1 139 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 NUP88Q99567 741 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 MYH6P13533 1939 aa12.55□□□□□ -0.4
CCDC90B-218ENST00000533761 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 IGF2BP3O00425 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 PLA2G6O60733 806 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 GOLGA8HP0CJ92 632 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 GNA11P29992 359 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 KRT2P35908 639 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 MAP2K1Q02750 393 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 RESTQ13127 1097 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 NBR1Q14596 966 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 KCTD1Q719H9 257 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
CCDC90B-218ENST00000533761 GOLGA6L4A6NEF3 574 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 MBD3O95983 291 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 NLRP5P59047 1200 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 TEX2Q8IWB9 1127 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 BEGAINQ9BUH8 593 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 BARHL2Q9NY43 387 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 ELP1O95163 1332 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 MYPNQ86TC9 1320 aa12.53□□□□□ -0.4
CCDC90B-218ENST00000533761 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 ZBTB5O15062 677 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 PKN1Q16512 942 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 HOMER1Q86YM7 354 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 SLF1Q9BQI6 1058 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 C6orf50Q9HD87 102 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-218ENST00000533761 CA12O43570 354 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 FDX1P10109 184 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 CYP2C8P10632 490 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 GCLCP48506 637 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 NAPAP54920 295 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 HERVK_113P62684 666 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 RASGRP2Q7LDG7 609 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms