RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 PIGSQ96S52 555 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
TSKU-204ENST00000533752 PCDHA1Q9Y5I3 950 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
TSKU-204ENST00000533752 ZBTB43O43298 467 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 COL6A1P12109 1028 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 ANO1Q5XXA6 986 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 RNF180Q86T96 592 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
TSKU-204ENST00000533752 LCTP09848 1927 aa18.33■□□□□ 0.53
TSKU-204ENST00000533752 LRRC37A2A6NM11 1700 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 PPP1R11O60927 126 aaPredicted RBP18.33■□□□□ 0.52
TSKU-204ENST00000533752 DUSP11O75319 330 aaKnown RBP18.33■□□□□ 0.52
TSKU-204ENST00000533752 RXRAP19793 462 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
TSKU-204ENST00000533752 RPS6KB1P23443 525 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 GHRHRQ02643 423 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 DPF3Q92784 378 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 SPC25Q9HBM1 224 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 MCM3APO60318 1980 aa18.33■□□□□ 0.52
TSKU-204ENST00000533752 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 PLEKHA8P1O95397 391 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 PDE4DQ08499 809 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 PPP2R5BQ15173 497 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 LRRC41Q15345 812 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 RTN1Q16799 776 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 SYTL5Q8TDW5 730 aaPredicted RBP18.32■□□□□ 0.52
TSKU-204ENST00000533752 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
TSKU-204ENST00000533752 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 NR2E3Q9Y5X4 410 aa18.32■□□□□ 0.52
TSKU-204ENST00000533752 SYNRGQ9UMZ2 1314 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 CFBP00751 764 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 EDNRBP24530 442 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 HSD17B4P51659 736 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 GJC2Q5T442 439 aaPredicted RBP18.31■□□□□ 0.52
TSKU-204ENST00000533752 Q6ZUG5 572 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 FBXO16Q8IX29 292 aaPredicted RBP18.31■□□□□ 0.52
TSKU-204ENST00000533752 SRBD1Q8N5C6 995 aaKnown RBP18.31■□□□□ 0.52
TSKU-204ENST00000533752 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
TSKU-204ENST00000533752 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
TSKU-204ENST00000533752 CEP290O15078 2479 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
TSKU-204ENST00000533752 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
TSKU-204ENST00000533752 EVI5O60447 810 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 PGK1P00558 417 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
TSKU-204ENST00000533752 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 TNFAIP2Q03169 654 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 BRF1Q92994 677 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
TSKU-204ENST00000533752 IWS1Q96ST2 819 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
TSKU-204ENST00000533752 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
TSKU-204ENST00000533752 OPLAHO14841 1288 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 CPA1P15085 419 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 CST5P28325 142 aaPredicted RBP18.29■□□□□ 0.52
TSKU-204ENST00000533752 METAP2P50579 478 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSKU-204ENST00000533752 ANAPC15P60006 121 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 ARHGEF16Q5VV41 709 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
TSKU-204ENST00000533752 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
TSKU-204ENST00000533752 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
TSKU-204ENST00000533752 UPF3AQ9H1J1 476 aaKnown RBP18.29■□□□□ 0.52
TSKU-204ENST00000533752 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 NID2Q14112 1375 aa18.29■□□□□ 0.52
TSKU-204ENST00000533752 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 GJA9P57773 515 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 TAPT1Q6NXT6 567 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
TSKU-204ENST00000533752 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 TBC1D5Q92609 795 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 COL20A1Q9P218 1284 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 Q9Y3F1 56 aa18.28■□□□□ 0.52
TSKU-204ENST00000533752 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
TSKU-204ENST00000533752 NKX3-2P78367 333 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 APOBRQ0VD83 1088 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 STXBP2Q15833 593 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms