RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ALDH5A1P51649 535 aaPredicted RBP14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 BEX3Q00994 111 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 FPGSQ05932 587 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 FBXO16Q8IX29 292 aaPredicted RBP14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 SLC17A8Q8NDX2 589 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 RGS22Q8NE09 1264 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 RUFY2Q8WXA3 655 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 PURBQ96QR8 312 aaKnown RBP14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 UBA5Q9GZZ9 404 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 MAF1Q9H063 256 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 PDGFCQ9NRA1 345 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 STXBP5LQ9Y2K9 1186 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 RPS6P62753 249 aaKnown RBP14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 DUSP28Q4G0W2 176 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 ASPRV1Q53RT3 343 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 TTC22Q5TAA0 569 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 CXCL17Q6UXB2 119 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 DNERQ8NFT8 737 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 WDR11Q9BZH6 1224 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 DDX49Q9Y6V7 483 aaKnown RBP14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 LTBP2Q14767 1821 aa14.52□□□□□ -0.09
CAPRIN1-213ENST00000533562 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 PDE4AP27815 886 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 SMAD3P84022 425 aaKnown RBP14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 PDE4DQ08499 809 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 TRDNQ13061 729 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 USH1GQ495M9 461 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 ZNF697Q5TEC3 545 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 MFSD5Q6N075 450 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 ENAHQ8N8S7 591 aaPredicted RBP14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 TBX21Q9UL17 535 aa14.51□□□□□ -0.09
CAPRIN1-213ENST00000533562 TNKSO95271 1327 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 RAD50Q92878 1312 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 GSPT1P15170 499 aaKnown RBP14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 ITGA7Q13683 1181 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 CDC37Q16543 378 aaPredicted RBP14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 BRDTQ58F21 947 aaPredicted RBP14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 IFIT1BQ5T764 474 aaKnown RBP14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 SLC30A10Q6XR72 485 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 MCF2L2Q86YR7 1114 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 FAM126BQ8IXS8 530 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 ADGRF4Q8IZF3 695 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 TMEM199Q8N511 208 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 SLC43A3Q8NBI5 491 aa14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
CAPRIN1-213ENST00000533562 CUL9Q8IWT3 2517 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 ABCB11O95342 1321 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 RBM47A0AV96 593 aaKnown RBP14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 NKRFO15226 690 aaKnown RBP eCLIP14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 DHX16O60231 1041 aaKnown RBP14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 CPT1AP50416 773 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 EPHB4P54760 987 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 PPIGQ13427 754 aaKnown RBP eCLIP14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 CPVLQ9H3G5 476 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 POLR3EQ9NVU0 708 aa14.49□□□□□ -0.09
CAPRIN1-213ENST00000533562 CD4P01730 458 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 EDNRBP24530 442 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 CHMLP26374 656 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 TMEM63BQ5T3F8 832 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 FBXO11Q86XK2 927 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 SCFD2Q8WU76 684 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 FAM161BQ96MY7 647 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 IL25Q9H293 177 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 SEMA6BQ9H3T3 888 aa14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 MRPL11Q9Y3B7 192 aaKnown RBP14.48□□□□□ -0.09
CAPRIN1-213ENST00000533562 UNC80Q8N2C7 3258 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 KPNA6O60684 536 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 PTGS1P23219 599 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 OR6J1Q8NGC5 347 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 NSUN6Q8TEA1 469 aaKnown RBP14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 IWS1Q96ST2 819 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 JMJD4Q9H9V9 463 aa14.47□□□□□ -0.09
CAPRIN1-213ENST00000533562 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 LAMA4Q16363 1823 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 CDH23Q9H251 3354 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 ERICH2A1L162 156 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 KLRF2D3W0D1 207 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 SUPT20HL2P0C7V6 817 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 TXNP10599 105 aaKnown RBP14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 CSF2RAP15509 400 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 TTLL4Q14679 1199 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 SEC23AQ15436 765 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 QRICH1Q2TAL8 776 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 RMDN3Q96TC7 470 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 AMNQ9BXJ7 453 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 PPP1R12CQ9BZL4 782 aa14.46□□□□□ -0.09
CAPRIN1-213ENST00000533562 HIPK3Q9H422 1215 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms