RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 PIGSQ96S52 555 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 ABCB11O95342 1321 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 DNAJC25-GNG10A0A024R161 153 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 ASB14A6NK59 587 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 ZBTB5O15062 677 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 SEPT4O43236 478 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 MSCO60682 206 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 DIS3LQ8TF46 1054 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 LCTP09848 1927 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 SYNGAP1Q96PV0 1343 aa13.3□□□□□ -0.28
UBASH3B-208ENST00000533451 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 GOLGA8BA8MQT2 603 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 GNAQP50148 359 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 Q6ZUG5 572 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 EEPD1Q7L9B9 569 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 FAM133AQ8N9E0 248 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 DPF3Q92784 378 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 BRF1Q92994 677 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 LENG1Q96BZ8 264 aaPredicted RBP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 PAWRQ96IZ0 340 aaKnown RBP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
UBASH3B-208ENST00000533451 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 KBTBD13C9JR72 458 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 ZBTB43O43298 467 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 CFBP00751 764 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 RARBP10826 455 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 AKR1A1P14550 325 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 RPS6P62753 249 aaKnown RBP13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 PDE4DQ08499 809 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 TRAF1Q13077 416 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 RTN1Q16799 776 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 SGMS1Q86VZ5 419 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 BBXQ8WY36 941 aaPredicted RBP13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 NRBP1Q9UHY1 535 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 OGDHLQ9ULD0 1010 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
UBASH3B-208ENST00000533451 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 CAPN2P17655 700 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 ALDH5A1P51649 535 aaPredicted RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 ACVR2BQ13705 512 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 FBXO16Q8IX29 292 aaPredicted RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 ARRDC4Q8NCT1 418 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 KCNB2Q92953 911 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 FGD4Q96M96 766 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 ABHD16BQ9H3Z7 469 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 XPNPEP3Q9NQH7 507 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 BRPF3Q9ULD4 1205 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 LRRC37A2A6NM11 1700 aa13.27□□□□□ -0.29
UBASH3B-208ENST00000533451 B4DLN1 442 aa13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 CEP290O15078 2479 aa13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 EPB41L2O43491 1005 aaKnown RBP13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 CYTH3O43739 400 aa13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 ZNF865P0CJ78 1059 aaPredicted RBP13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms