RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ADCY3O60266 1144 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 XBP1P17861 261 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 ST3GAL1Q11201 340 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 NPLOC4Q8TAT6 608 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 APBA2Q99767 749 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 PTCH2Q9Y6C5 1203 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 OPLAHO14841 1288 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 JAK2O60674 1132 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 FDPSP14324 419 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 GNA11P29992 359 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 HSD17B4P51659 736 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 NLRP5P59047 1200 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 GHRHRQ02643 423 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 TEX2Q8IWB9 1127 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 FAM133AQ8N9E0 248 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 CCDC148Q8NFR7 591 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 SYTL5Q8TDW5 730 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
TRAPPC4-211ENST00000533012 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 B4DLN1 442 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 DTNBO60941 627 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 GRK4P32298 578 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 ADCY7P51828 1080 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 CCL14Q16627 93 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 DNERQ8NFT8 737 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 ZMYND12Q9H0C1 365 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
TRAPPC4-211ENST00000533012 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 ASB14A6NK59 587 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 MEIS2O14770 477 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 ELNP15502 786 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 CUL4AQ13619 759 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 TRIM29Q14134 588 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 SLC9C1Q4G0N8 1177 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 FCHSD1Q86WN1 690 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 RMDN3Q96TC7 470 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 TINF2Q9BSI4 451 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
TRAPPC4-211ENST00000533012 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 SPDYE3A6NKU9 549 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 HMGCRP04035 888 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 UBXN2AP68543 259 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 COL13A1Q5TAT6 717 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 TRIB2Q92519 343 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 IWS1Q96ST2 819 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 FLRT1Q9NZU1 646 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 PCDHA4Q9UN74 947 aa12.89□□□□□ -0.35
TRAPPC4-211ENST00000533012 CYP2C19P33261 490 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 UBE2SQ16763 222 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 FGD4Q96M96 766 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms