RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ORC2Q13416 577 aaPredicted RBP10.4□□□□□ -0.74
BDNF-216ENST00000532997 RPS6KA1Q15418 735 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 FIGNQ5HY92 759 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 REXO1Q8N1G1 1221 aaKnown RBP10.4□□□□□ -0.74
BDNF-216ENST00000532997 VGLL2Q8N8G2 317 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 CCDC43Q96MW1 224 aaKnown RBP10.4□□□□□ -0.74
BDNF-216ENST00000532997 OSBPL9Q96SU4 736 aa10.4□□□□□ -0.74
BDNF-216ENST00000532997 PRLRP16471 622 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 TXKP42681 527 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 ITIH3Q06033 890 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 CALCRLQ16602 461 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SPATA4Q8NEY3 305 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 A0A087X0B3 334 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 HEXIM1O94992 359 aaKnown RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 LDHBP07195 334 aaKnown RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 CYP19A1P11511 503 aaPredicted RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 AMPD2Q01433 879 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 KLHL30Q0D2K2 578 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 TROAPQ12815 778 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 PKN1Q16512 942 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 MYOCDQ8IZQ8 938 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SRBD1Q8N5C6 995 aaKnown RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 NYXQ9GZU5 481 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 RABEP2Q9H5N1 569 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.39□□□□□ -0.75
BDNF-216ENST00000532997 CYP2D7A0A087X1C5 515 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SMCO2A6NFE2 343 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 TULP1O00294 542 aaPredicted RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 EIF3HO15372 352 aaKnown RBP eCLIP10.39□□□□□ -0.75
BDNF-216ENST00000532997 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 PLCG2P16885 1265 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 GUCY2DQ02846 1103 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 PSMD2Q13200 908 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 FMNL3Q8IVF7 1028 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 RASGRP4Q8TDF6 673 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SNX29Q8TEQ0 813 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 ERGIC2Q96RQ1 377 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SLC39A2Q9NP94 309 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 NF2P35240 595 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 ATP1A2P50993 1020 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 IRAK1P51617 712 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 ARID5AQ03989 594 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
BDNF-216ENST00000532997 GSPT2Q8IYD1 628 aaKnown RBP10.39□□□□□ -0.75
BDNF-216ENST00000532997 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 CETN3O15182 167 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 EZRP15311 586 aaKnown RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 TECP42680 631 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 HERVK_113P62684 666 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 RASSF7Q02833 373 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 E2F4Q16254 413 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SUSD4Q5VX71 490 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 ANKS4BQ8N8V4 417 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 WDR66Q8TBY9 1149 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SH2D4AQ9H788 454 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 NLRC4Q9NPP4 1024 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SIPA1L3O60292 1781 aaPredicted RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 PVALEFA0A1B0GWK0 134 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 MAP2K2P36507 400 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 CEP85LQ5SZL2 805 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 DYMQ7RTS9 669 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 CPLX4Q7Z7G2 160 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 CROCCP2Q86T23 111 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 ZNF34Q8IZ26 560 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.38□□□□□ -0.75
BDNF-216ENST00000532997 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 STMN4Q9H169 189 aaPredicted RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 EPB41L5Q9HCM4 733 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 GRID2IPA4D2P6 1211 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 E7EVH7 732 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 BUB1O43683 1085 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SERPING1P05155 500 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 NR1D1P20393 614 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SEPT2Q15019 361 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 MEA1Q16626 185 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 SYCE1Q8N0S2 351 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 LARP4BQ92615 738 aaKnown RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 NAP1L3Q99457 506 aaPredicted RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 LSM14BQ9BX40 385 aaKnown RBP10.38□□□□□ -0.75
BDNF-216ENST00000532997 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 ANKIB1Q9P2G1 1089 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 RASAL2Q9UJF2 1139 aa10.38□□□□□ -0.75
BDNF-216ENST00000532997 MYH7P12883 1935 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 FANCGO15287 622 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 RAD21O60216 631 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 FLOT1O75955 427 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
BDNF-216ENST00000532997 FKBP3Q00688 224 aaKnown RBP10.37□□□□□ -0.75
BDNF-216ENST00000532997 C10orf76Q5T2E6 689 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms